Detail



ID : Ahg930354

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930354|scaffold_302811.1
Sequence
TTTCTGATCT GTGAGGAGAA ATGGGACAAC AGCAATCAAA AGGGGAATTG CTGTATCAGC AAGTGAGTTA TGGTAACTCT GAAGGAATTC GAACTCTTCA TCGAGATGGT GCAGACCTTG AGTGGATGGA TAGAGAAGGA AAAACTGCGT TGATCTTGGC TTGTATGAAC TCGGAGCTAT ATGATGTTGC TAAAACTTTG ATTGAGCTGG GTTCTAATGT TAATGCTTAT CGTCCTGGTC GTCATGCTGG GACTCCTCTG CACCATGCTG CAAAAAGAGG TCTTGAGAAC ATTGTTAAGT TACTTCTTTC GCACGGTGCA AATCCACTTG TTCTCAATGA TGATTGTCAG ACACCACTTG AGGTTGCTAG AGTCAAAGGG TTCAGCAATG TCGTACGTGC AATTGAGAAA CACATCTGCT TGTTCTCGGG TTGGATGCGG GAATTTTACG GCCCTACCTT TCTCGACTTA TTTGCTCCGC AGCTTCTTTC AAGAAGAGTA TGGGTAGTCA TTGTACCTAC TGGTTCAAGA AACCCTACAA AGCCTTTCAA ATTGGAGCTG GTTGTGTATG CTAGTCTGCA GGATGCGCAG CCACGCACGA TGATGCCTTT GTGGAAAGCA AACTTAGAAG AACCAAAAGC AAAGCAGTCC GATACTTCAG TGATGATCGT TGATAACTCC ACAATCCCAA GCCGCAGGAT GAAGAAACGA AGGGTCTGCG CCTCCCACGG GAGACGTAGG CCTCAAGTAG TTAGGCAAAC ACGACTTAAA CTCGCACCTG CGACTGAAGG TGACAGCCAA CAGCTGAAGT GGTTTTGTGA TGCATGTAAA GGAATTCCAC AGCCGATGCA TCCACCGGTC TTCCTCCAAA CAGCACCATC TGCTCCACCA CCACCATCAG AAGATGAACT AGCCATGGCA ATGAACGCCT CGCTTCACAC TACTATGAGT GACCCATCAA ATCTCAATCA CCATTCCATC GGTCAAGCAA GTTCCTCATC CGGTCCAAGC TCATCAACCG CCCCTCCCTC AGGAAAAGCA AGCGCCTTTG CGTTCAATAG CCATGGAATT GGCATTGTCC TAGAATCTTC ACCATCAGCT CCTCCATTGA CAGATAATGA TATAGCAGCC GTAGACGAAG GTCCAATTCA TTACCCATCG ATCGATTCAA CACCTGTCGA TCTCCCATCT GCTTCTTCTC TTCCAGCTCC AACCGAAGGT GAAAGGAAAG AAGACGGGAG CACTGGAACA TGTGCGATAT GTCTAGATGC TCCATCTGAA GCAGTCTGTG TCCCGTGTGG ACATGTCGCG GGATGTATGT CTTGCTTGAA GGAGATCAAA TCCAAGAATT GGGGATGTCC TGTCTGTCGC GCCAAGATCG ATCAGGTTGT TAAGCTGTAC CGGGTCTGAA AACAGGTACA AACTCCATG 
Length1429
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10002692.. 10005301
Download Sequence
A.thaliana
AGI-codeAT3G23280.1
DescriptionXB3 ortholog 5 in Arabidopsis thaliana
TAIR curator summary
Alias[XBAT35][XB3 ortholog 5 in Arabidopsis thaliana]
Gene coexpression
MR
MR Locus Description
5.91608 Ahg932741
7.48331 Ahg921142 NAD kinase 2
8.94427 Ahg485239
10.7703 Ahg474017 associated molecule with the SH3 domain of STAM 1
12.49 Ahg491819 protein kinase family protein / WD-40 repeat family protein
12.6095 Ahg932344 Protein kinase superfamily protein
16 Ahg481550 ARM repeat superfamily protein
16.8523 Ahg355042 pleckstrin homology (PH) domain-containing protein
17.3205 Ahg318458 calmodulin binding;transcription regulators
17.6635 Ahg479603 Ethylene insensitive 3 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression