Detail



ID : Ahg922858

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922858|scaffold_104139.1
Sequence
TTTTATTTTT AGTATTTATT AGATGATCAA AACTAAAGGC AGAGGAGCTA CGGACCGACT AAAATCTCTG TCGCCGACGA CAAACAACTC TGTCATCGTT GCCGACTCCA TCCCTTTCAA CCACAAAGAA GCCTTCTTTA AGGGGCACGG AACTTCCTTG ATCGACGGTG AGTTGCTGAC GACGGTCTGT GGAGTTGTGA TAAACGTGGA CAAGCTCGTC TATGTACGCA CCTTGCGAGC CAGGTACAAG CCTGAGGTTG GGGATATTGT GGTAGGCCGT GTGATTCAGG TTGGTCAAAG CCGTTGGAAA GTGGAGCTCA ACTCTACTCA AGATGGAATA CTGAAGCTTT CTTCCATCAA TATGCCTGAT TCTGTTCAGG CCCAAGTAGG CGAAACTCAG CGTGATGGCA GCCTGCAGCT ACTACTAGCT GGAAGTAACA AGTATGGAAA GCTCGACAAG GGACAGCTTC TCAAAGTTGA CCCTTACTTG GTTAAGAGAA GCAACCTTCA CTTTCATTTC ATAGAAAGTC ATGGGATCGA TTTGATTCTT GGCCGTAATG GCTTCATTTG GGTCGGGGAA CACGCCCATG CCCAATATCC TATGGTTTTG GATGATGAGA TCATCTCACT AAAGACTCGG CAAAGCATTG TTAGAATCGG GAATGCGATA CGGGTCTTGT CTAACCTTGC CTTCACCGTG ACTCTAGAAG TGATCATGGA AACTGTTAAC TTAAGCAACA TTGAGAATAT CGACATACAT GACATGCTCG GATCAGAGTT CCACGTTCTG GTCACAGAGA ACCAAGCTGA AAGAAGAAGA AGATGTGTAT AGAGGAAATT TGTGAAAACC CC 
Length852
Protein Sequence
Protein Residue
Map Locationscaffold_1: 21168876.. 21170990
Download Sequence
A.thaliana
AGI-codeAT1G03360.1
Descriptionribosomal RNA processing 4
TAIR curator summary
Alias[ATRRP4][RRP4][ribosomal RNA processing 4]
Gene coexpression
MR
MR Locus Description
1 Ahg922860 Inositol monophosphatase family protein
1.41421 Ahg891097 RNA-binding (RRM/RBD/RNP motifs) family protein
3.87298 Ahg355852 RNA-binding (RRM/RBD/RNP motifs) family protein
4.3589 Ahg914996 ribosomal RNA processing 4
4.58258 Ahg355810 RNA-binding (RRM/RBD/RNP motifs) family protein
7.28011 Ahg948315
7.74597 Ahg359123
16.7033 Ahg918788
17.7764 Ahg919631 copper/zinc superoxide dismutase 1
18.1659 Ahg936852
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression