Detail


ID : Ahg891097

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891097|Al_scaffold_0007_3083
Sequence
ATGGCCACTT GTAGCCAGAA ATCGGTAAAT AAAGTTTTTG CTGCTCCTCT TTTAGGTAAG CGAAAGCCGG ATGATAATTT GGAGACCCAA ACGATTCTGA AGAAACATAA GGAAACATCC GAGGAGAAGG AGACAACGAA AGATGTTGCT GAGCAGATGG AGTTGTTGGA GACAAAGCCT AATTTAATCT CAGTGAAGGA AGCTGCCGTA CGAAAAAAGA CTCTCTTTGT TGGCAATATC CCATGCAAGA CTAAAATACC AAATATCATC GATTTCTTCA AAAATGTTGG AGAAATTGTT CGTGTTCAAC TTATTCTAAG CCTCAAGGGT ACGCATGTGG GCTGTGGCTT TGTTGAGTTT GCTTCTGCTA ACGAAGCAGA GAAGGCACTG GAAAAGAAGA ACGGTGAATA TTTGGGCGAT CATAAGATTG TTCTTGAGGA AGCTACTAAG GGAGCTAAAT ATCTTCCACC CAAGTATTGC TTAGATCACA TGGTTTGGTA CGAAGACTAC CTTCGACGAG AAGGCGGCCT TCCCACAGAA GAAGAGGAGA CACCTCTAGA TTCTGTTGAG GAAGTGCTCT TTGTTGCCAA TCTCTCTCCC CAAACTAAAT TATTACATGT CATCAATTTC TTCGAAAATG TTGGAAAAGT TGTTAGTGTT CGACTCATTG TAAACAGTGA GGGTAAGCAT GTGGGCTATG GCTTTGTTGA GTTTGCTTCT GCTGACAAAG CAAAGAAGGC CATGGAAACG AAGAATGGTA CAACCTTGCA GAGAAGCTTT GGTAAGGGAT TTAAGTATTT GCATCTTGAT TACGAAGACT ACCTTCGACG ACAAAAGCTT CTGTTAGAAG AAGATGAGAC ACCTCCTGAT TCTGTTGAGG CAGTTGCTGC AATAAAAAAG ACGCTCTTTG TTACCCATCT ATTTCATCAA ACTGTAATAT CACATATCAT CAACTTCTTC AAAGATGTTG GAGAAGTTGT TCATGTTCGA CTTATTGTAA ATCACAAGGG CAAGAATGTG GGCTGTGGCT TTGTTCAGTT TGCTTCTATT GACGAAGCAA AGAAGGCACT GCGAAAGAAG TGTGGTAAAA ATTTCCTTGG TCGCGATATT TTTCTTGACG TGGCTGAGAT AGCTCCATAC CCTCTCCGAC CAAGGTACAA CCTTGCAGAG AAGGTCTGGA ACAAAGTCTA CCTTCGACAA GAAAGCCTTC TGATAGAAGA AGATGATTTG GAGGCCAAAC CGAATCTGAA GAAACAGGAG GTACCTATGA TGGGCGAATT CTGCGGTAAC AAGATTACCT TCTCTGAAGA CTCTGAAGAC TCTGAAGGCT ATGAAGTCTA TGAAGGTGAA GATTAA
Length1356
Protein Sequence
Protein Residue
Map Locationscaffold_7: 16882196.. 16885259
Download Sequence
A.thaliana
AGI-codeAT5G41690.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg922858 ribosomal RNA processing 4
2 Ahg355852 RNA-binding (RRM/RBD/RNP motifs) family protein
3.4641 Ahg355810 RNA-binding (RRM/RBD/RNP motifs) family protein
9.53939 Ahg888078 Protein of unknown function (DUF3414)
13.7477 Ahg936852
16.2788 Ahg317312
16.7332 Ahg937635 RNA-binding (RRM/RBD/RNP motifs) family protein
17.72 Ahg359033 F-box associated ubiquitination effector family protein
20.8327 Ahg478742 Ubiquitin-conjugating enzyme family protein
22.9783 Ahg947382 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression