Detail


ID : Ahg923008

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923008|scaffold_104289.1
Sequence
CGAATATTCC CTCTCCCTCA ATGGAAAACG ACGTCAAGGA GAAGCTTGAA GAAGAAGAAG AAGAAGCTAA CCGTCTTCTT CCTCCTCCTC ATCCTCAATC TCTCCCTTCC TCCGATTCCG AATCCGAAGC CGCTTTCGAA TCAAACGAAA AGATCCTAAT CGTCGATTTC GAATCTCCCG ACGATCCAAC AACCGGAGAC TCACCACCGC CATTCTCGTG GCGGAAACTA TGGTTATTCA CCGGTCCAGG TTTCTTAATG AGTATAGCGT TTTTGGATCC AGGGAATTTA GAAGGAGATC TACAAGCTGG TGCAATCGCT GGCTATTCTC TGTTATGGCT ATTGATGTGG GCAACAGCTA TGGGATTGTT GATTCAGATG TTATCAGCTA GAGTTGGTGT TGCTACTGGT CGTCATTTAG CTGAGCTTTG TCGTGATGAG TATCCGACTT GGGCTAGGTA TGTGCTTTGG TCTATGGCGG AACTTGCTTT GATTGGTGCT GATATTCAAG AGGTTATTGG TAGTGCTATT GCTATTCAGA TTCTTAGCCG TGGTGTCTTG CCTCTTTGGG CTGGTGTTGT TATTACGGCT TCGGATTGTT TTTTATTTTT GTTTCTAGAG AATTACGGTG TGAGGAAGTT AGAAGCTGTT TTTGCAGTTT TGATCGCAAC TATGGGTTTG TCCTTTGCTT GGATGTTTGG TGAAACCAAG CCGAGTGGGA AAGAACTTAT GATAGGTATT TTACTACCGA GGCTTAGCTC GAAGACAATT AGACAAGCAG TAGGTGTTGT TGGCTGTGTC ATAATGCCTC ACAATGTGTT TTTGCATTCG GCTCTTGTAC AATCGAGGAA AATCGATCCA AAGAGGAAAT CCCGGGTTCA AGAGGCGCTT AATTACTATT TGATCGAGTC ATCCGTAGCC CTTTTCATCT CCTTCATGAT TAACCTGTTT GTGACTACTG TCTTTGCAAA GGGATTTTAT GGAACTGAGA AAGCTAATAA CATTGGCCTA GTTAATGCTG GTCAGTATCT TCAAGAAAAG TTTGGAGGTG GGCTTCTTCC GATTCTTTAT ATATGGGGAA TCGGGTTGTT AGCAGCCGGA CAGAGCAGTA CAATAACTGG TACATATGCT GGACAGTTTA TAATGGGCGG TTTTCTGAAC CTCCGGCTTA AGAAATGGAT GAGGGCAGTA ATAACAAGAA GCTGTGCTAT TGTGCCAACC ATGATTGTGG CAATCGTGTT CAATACTTCT GAAGCTTCCT TGGATGTTTT GAATGAATGG CTCAATGTGC TTCAGTCTGT ACAAATTCCT TTTGCTCTTC TGCCTCTTCT AACCTTGGTA TCTAAAGAAG AAATTATGGG AGACTTCAAG ATTGGTCCCA TTCTCCAGAG AATAGCTTGG ACTGTGGCTG CACTTGTAAT GATCATCAAC GGGTATCTTC TGTTGGATTT CTTTGTATCA GAAGTCGACG GGTTTATGTT TGGAGTTACG GTCTGCGTCT GGACAACTGC TTATATCGCT TTTATAGTCT ACCTCATTTC ACACAGCAAC TTTTTTCCTT CTCCTTGGTC TTCCTCTTCC ATAGAACTTC CCAAAAGAGT GTCCGTCTCC GATAGCTAGC TGCACAAAAA TAACTGCCCT
Length1640
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22513528.. 22515907
Download Sequence
A.thaliana
AGI-codeAT1G47240.1
DescriptionNRAMP metal ion transporter 2
TAIR curator summaryMember of the NRAMP2 gene family of metal ion transporters.
Alias[ATNRAMP2][NRAMP2][NRAMP metal ion transporter 2]
Gene coexpression
MR
MR Locus Description
2 Ahg483782 Mitochondrial substrate carrier family protein
13.7113 Ahg485584 Dihydrolipoamide acetyltransferase, long form protein
16.8819 Ahg942945 SPA1-related 2
19.4422 Ahg483334 vascular plant one zinc finger protein 2
23.4521 Ahg480572 ubiquitin-conjugating enzyme 23
30 Ahg495592 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
33.9853 Ahg472531 Vacuolar sorting protein 39
35.5106 Ahg495713
37.229 Ahg496018 Protein kinase superfamily protein
37.7492 Ahg488259 Proteasome component (PCI) domain protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression