Detail



ID : Ahg924090

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924090|scaffold_105371.1
Sequence
ATCCCATTCT AGTGTTGGAT ATGGCTGGTG GGCAAGTGGA GAAGCGAGTC AAATACAAGA GCTCTGTCAA GGATCCTGGA ACTCCTGGAT TTCTCAGAAT TAGAGAAGGG ATGTTGCTCT TCGTCCCTAA TGATCCCAAA TCAGATTCAA AGCTCAAAGT GCTCACCCAG AACATCAAAA GTCAAAAAAA TACAAAAGAA GGATCAAATA AACCTCCTTG GCTCAATCTG ACCAACAAGC TGGGAAAGAG TCATATCTTT GAGTTTGAGA ATTATCCTGA CATGCATGCT TGCCGTGATT TCATCACTAA TGCCCTTGCT AAATGTGAAG AGGAGCCTAA TAAATCCGTT GTCTCGACAT CTTCCGAGCA ACTCAGTATT AAGGAATTGG AGCTACGCTT CAAGCTTCTG AGAGAAAATA GTGAGCTGCA GAGATTACAT AAGCAATTTG TGGAAAGTAA AGTACTGGCG GAAGATGAAT TCTGGGCTAC AAGAAAGAAA TTACTTGGTA AAGATTCCAT CAGAAAGTCA AAACAGCAGG TCGGGCTTAA GAGCATGATG GTTTCTGGTA TCAAACCATC TACTGATGGG CGGACTAATA GAGTGACGTT TAACTTGACA CCTGAGATAA TTTTTCAGAT TTTTGCTGAG AAGCCGGCTG TTCGGCAGGC ATTCATCAAT TATGTTCCAA GTAAGATGAC AGAAAAAGAC TTCTGGACAA AATATTTTAG AGCGGAATAT CTCTACAGCA CAAAAAATAC AGCAGTAGCT GCAGCAGAAG CTGCTGAGGA CGAGGAACTC GCTGTCTTTC TGAAGCCTGA TGAGATATTG GCTCGGGAAA CTCGTCAAAA GATTAGACGG GTTGATCCAA CTCTTGACAT GGAGGCTGAC CAGGGAGACG ACTACACTCA TCTTATGGAC CACGGTATCC AGCGTGATGG CACCATGGAT GTTGTTGAAC CACAGAATGA TCAGTTTAGA CGATCACTTT TGCAAGATCT TAATCGTCAT GCTGCTGTTG TATTAGAAGG CAGAAGCATT GATGTTGAGT CAGAAGATAC AAGGATTGTT GCAGAGGCTC TCACACGGGT GAAACAAGTA AGCAAAGCTG ATGGCGAAAC CACCAAGGAC GCTAATCTGG AGAGATTGGA GAGAATGTCC CGGTTGGCAG GAATGGAGGA TCTTCAAGCA CCACAAAACT TCCCGTTAGC GCCGCTTTCT ATCAAGGATC CTCGTGATTA CTTTGAATCT CAACAAGGAA ACGTCCTCAA TGTACCCAGA GGAGCAAAGG GATTGAAGAG GAATGTCCAT GAAGCTTATG GATTATTAAA AGAATCCATT TTGGAGATTA GAGCTACAGG ATTAAGTGAT CCGTTGATTA GGCCTGAAGT TTCCTTTGAG GTTTTCAGTT CGTTAACCCG AACTATCTCA ACGGCCAAAA ATATTATTGG GAAGAACCCA CGAGAGAGCT TTCTGGACAG ATTACCAAAG TCCACTAAGG ATGAAGTTCT ACACCATTGG ACATCAATAC AAGAATTACT GAGACATTTT TGGTCATCTT ATCCGATAAC AACCACATAT CTTCATACCA AGGTTGGTAA ACTGAAGGAT GCAATGTCCA ACACTTATTC AAAACTCGAG GCAATGAAAG AGTCGGTGCA ATCTGATCTC CGGCATCAGG TTTCTCTACT GGTTCGTCCA ATGCAACAGG CTCTTGACGC TGCGTTCCAA CACTACGAAG CGGATCTGCA GAGAAGAACA GCTAAGAGCG GTGGCGAAAG ACCAAACGGC TACATATAGA AGACAAAAGA CAAAAAAGCT 
Length1820
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28025440.. 28029922
Download Sequence
A.thaliana
AGI-codeAT1G55750.1
DescriptionBSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.58258 Ahg495573 DEA(D/H)-box RNA helicase family protein
10.0995 Ahg345267 helicase domain-containing protein
14.4568 Ahg477087 ARM repeat superfamily protein
18.3303 Ahg350126 U3 ribonucleoprotein (Utp) family protein
21.0238 Ahg951776 pigment defective 320
21.9089 Ahg480280 MAK10 homologue
22.9129 Ahg492316 RNA polymerase III RPC4
22.9783 Ahg470821 Protein kinase superfamily protein
25.6905 Ahg476466
26.6833 Ahg344464 Structural maintenance of chromosomes (SMC) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression