Detail



ID : Ahg925560

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925560|scaffold_201121.1
Sequence
TGATCTGATC AAATAAAATT ACTATGGTTC GAGAGAAAGT CAAAGTATCT ACTCGGACAC TACAGTGGAA GTGTGTTGAA TCAAAAAGAG ACAGTAAGCG TCTTTATTAT GGACGCTTTA TTCTGTCTCC ACTTATGAAA GGTCAAGCCG ACACAATAGG CATTGCGATG CGAAGAGCTT TACTTGGCGA AATAGAAGGA ACATGTATTA CACGTGCAAA ATCTGAGAAC ATACCACATG ACTATTCTAA CATAGTAGGT ATTCAAGAAT CAGTACACGA AATTTTAATG AATTTGAACG AGATTGTATT AAGAAGTAAT CTATATGGAA CGCGCAACGC GCTTATTTGT GTCCAAGGTC CTGGATATAT AACTGCTCGA GACATAATTT TACCGCCCTC TGTAGAAATC ATTGATAATA CACAGCATAT AGCTACCTTA ACGGAAACAA TAGATTTGTG TATTGAATTA AAAATCGAGA GGAATCGCGG ATATAGTCTA AAAATGTCAA ATAACTTTGA AGACAGAAGT TATCCTATCG ATGCTGTATT CATGCCTGTT GAAAACGCGA ATCATAGTAT TCATTCTTAT GGGAATGGGA ATGAAAAACA AGAGATTCTT TTTCTAGAAA TATGGACAAA TGGAAGTTTA ACTCCTAAAG AAGCACTTCA TGAAGCCTCC CGGAATTTGA TTAATTTATT TATTCCTTTT CTACATGTAG AAGAAGAAAC GTTCTATTTA GAGAACAATC AGCATCAAGT TACTTTACCC TTTTTTCCTT TTCATAATAG ATTAGTTAAC CTAAGAAAAA AAACAAAAGA ACTAGCCTTT CAATATATTT TTATTGACCA ATTAGAATTG CCTCCCAGAA TCTACAATTG TCTCAAAAAG TCCAATATAC ATACATTATT GGACCTTTTG AATAACAGTC AAGAAGACCT TATCAAAATT GAACATTTTC ACGTAGAAGA TGTAAAAAAG ATATTAGACA TTCTAGAAAA AAAATAGAAA AAGCATTTCA ATTTCAAATT G 
Length1031
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8593002.. 8594032
Download Sequence
A.thaliana
AGI-codeATCG00740.1
DescriptionRNA polymerase subunit alpha
TAIR curator summaryRNA polymerase alpha subunit
Alias[RPOA][RNA polymerase subunit alpha]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg947484
8.60233 Ahg891432
10.3923 Ahg473318 ribosomal protein L23
11.8322 Ahg486735 ADP-ribosylation factor A1E
13.6748 Ahg315565 ribosomal protein L23
16.1245 Ahg346340 Leucine-rich repeat protein kinase family protein
17.8885 Ahg952182 Protein of unknown function (DUF760)
25.9808 Ahg933002
28.6182 Ahg475602 ribulose-bisphosphate carboxylases
36.3318 Ahg931990 rRNA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression