| Annotation |
|---|
| Description | jgi|Araly1|925610|scaffold_201171.1 |
| Sequence |
TTCTAATTGG TTGAGATAAA CATGGCGAGG AACGCAATCT CTGACGATGA AGAGGATCAT GAGCTAGAGG ATGATGACGG AGAGCCAGTT CATGGAAATC CAGTTGAGCA CGATGACAAC GATGATGAAG AAGATGATGA TGACGTTGGG AATGAGTATG AGAATGATGG GTTCATAGTG AATGATGAAG AAGAAGAAGA AGAAGATGAA GAGGACGAAG AAAGGAAAAA TAGCGATGAG GAGAGGCAGA AAAAGAAGAA GAAACGAAGG AAAAAGGACG AAGATCTTGA TGAAGATGAT TATCTGCTTC TCCAAGATAA CAACGTCAAA TTCGAAAAGA GGAAGTATAA GCGGTTGAAG AAAGCTCAAA GGGAAAGGGA CAATGGTCCG GGGGAATCAT CCGATGATGA GTTTGATGGG AGAGGTGGAG CTAAAAGAAG TGCTGAGGAT AAGATCAAAG ACAGGCTTTT TGATGATGTT GATGTTGATG ATCCACCTGA TGATGTAGGT GATGAGGAAG ACTTAGTTGT GGAAGAAGAT GTAGTTGGGA GCGAGGACGA AATGGCAGAT TTTATTGTAG ATGAAGATGA TGGGCTTGGT GCTCCTAAGA GGGGGAACTC GAAAAAAAAG AAATTTAGGC AGGGATCAGA TATTAATGCT ATGCGAGACG CTAATGAAAT ATTTGGTGAT GTTGACGAAT TATTGACAAT TCGCAAAAAG GGTTTGGCAT CTAGTGAAAG GATGGAAAGA AGGCTCGAAG ATGAGTTTGA ACCAACTGTT CTTTCTGAGA AATATATGAC AGGGAAAGAT GATGAAATTC GCCAGCTTGA TATTCCTGAG AGAATGCAGA TATCTGAAGA AAGCACCGGA AGCCCTCCTG TAGATGAAAT TAGCATTGAA GAAGAAAGCA ATTGGATATA TGCTCAACTT GCTTCTCTAC TTAAAGAATC TGATGGAACT TTTGATGGGC GGGGTTTCTC GGTTAATAAG GATGACATCG CAAAATTTTT GGAGCTACAT CATGTGCAGA AATTAGAGAT ACCCTTTATA GCTATGTACC GAAAGGAGCA ATGCCGGAGC TTGTTGGACA CTGGTGATGT TGATGGCGCC AATCAAGACA AGAAACCTGA GACCAAGTGG CATAAGGTCT TCTGGATGAT TCATGACTTG GATAAGAAGT GGCTCCTTCT TCGAAAAAGG AAAATGGCGT TGCATGGTTA CTATACAAAA CGTTACGAAG AAGAGTCTAG GAGGGTCTAT GATGAAACTA GACTTAATCT AAACCAGTAT CTTTTTGAAT CAGTCATTAA GTCCCTTAAA GTTGCAGAAA CAGAAAGAGA AGTTGATGAT GTAGATTCCA AGTTCAACTT GCATTTCCCT CCCGGTGAAA TTGGTGTTGA TGAAGGGCAG TATAAGAGGC CGAAAAGGAA ATCACAATAT AGCATCTGCA GTAAAGCGGG GCTCTGGGAG GTTGCAAACA AATTTGGGTA TAGTGCTGAG CAATTGGGAC TTGCATTGTC CTTAGAAAAA CTGGTTGATG AACTTGAGGA CGCAAAGGAA ACACCAGAGG AGATGGCTCA GAACTTTGTG TGCGCAATGT TTGAAAATCC TCAGGCCGTT CTGAAGGGTG CACGGCATAT GGCTGCAATT GAGATAAGTT GTGAGCCATC AGTCAAAAAG TATGTCCGTG GCATTTATAT GGAGAATGCA GTGGTCTCAA CAAGTCCAAC AGCAGATGGA AATACAGTAA TAGATTCGTT CCATCAGTTT TCTGGCATTA AGTGGTTACG TGAAAAGCCA TTGAGCAAGT TTGAGGGTGC ACAATGGCTT CTCATTCAGA AGGCAGAAGA GGAGAAACTT CTTCAAGTAA CCTTCAAGCT GCCTGAGAAT TACATGAATA GGCTAATTAG TGACTGCAAT GAACACTATC TAAGTGTTGG TGTTAGTAAG TATGCTCAAC TCTGGAATGA GCAAAGAAAG TTGATAGTGG AGGATGCACT TCATGCTTTT CTTTTGCCAT CAATGGAGAA AGAAGCAAGA TCCTTGCTAA CTAGCAGAGC GAAGAGTCGG TTGCTTTCAG AGTATGGACA GGCTTTGTGG AACAAGGTGT CTGCAGGGCC ATATCAAAAG AAAGAAATGG ACATGAATTC AGATGAGGAA GCTGCACCGA GGGTCATGGC ATGTTGTTGG GGACCTGGAA AGCCACCAAA TACATTTGTG ATGCTGGACT CATCAGGCGA GGTGCTTGAC GTGCTTTATG CTGGATCCCT CACATCGCGA TCTCAAAATG TCAACGACCA GCAACGTAAA AAGAGTGACC AGGATCGTGT TTTAAAGTTT ATGATGGACC ACCAACCGCA TGTTGTGGCT TTAGGAGCTG TCAATTTGTC TTGTACTCGT CTGAAGGATG ATATTTATGA GGTCATATTC CAGATGGTGG AGGAAAAACC TAGAGATGTC GGACATGGGA TGGATGATTT AAGCATTGTT TATGTGGATG AATCGCTTCC TAGGCTATAT GAAAATTCTC GAATCTCGGG TGAACAGCTA CCTCAGCAGT CAGGGATCGT GAAACGTGCA GTTGCTCTTG GACGCTATCT CCAGAATCCA CTAGCGATGG TGGCAACTTT ATGCGGTCCA GGTCGGGAAA TTTTGTCTTG GAAGCTTCAT CCGTTGGAGA ATTTTCTTCA GCTAGACGAG AAGTATGGAA TGGTTGAGCA GGTTATGGTT GACATTACAA ACCAGGTTGG AATCGATATT AACTTGGCAG CTAGCCATGA GTGGTTCTTT TCTCCTTTAC AGTTCATATC TGGACTTGGG CCTCGGAAAG CTGCATCCTT GCAGAGGTCG CTTGTAAGAG CTGGTTCAAT ATTTGTCCGC AAGGACCTAA TAATGCATGG ACTTGGTAAA AAGGTTTTTG TAAATGCAGC CGGTTTCTTG CGCATCCGCA GAAGTGGGCT GGCTGCTAGT AGCAGTCAAT TTATCGACTT ATTGGATGAC ACCAGAATCC ATCCCGAGTC ATATAGTCTT GCGCAAGAAT TGGCGAAAGA TATATATGAT GAGGATGTCA GAGGTGATTC AAATGATGAT GAGGATGCAA TAGAAATGGC TATTGAGCAT GTGAGAGATC GGCCAGCTTC TTTGAGAAAA GTTGTCCTTG ATGAATATCT TGCCAGCAAG AAACGGGAGA ATAAGAAGGA AACTTATAGC AATATCATAA GAGAATTAAG CTGTGGTTTC CAGGATTGGC GGATACCATT TAAAGAGCCA AGTCCAGATG AAGAATTTTA CATGATTTCA GGTGAAACTG AGGACACCAT AGCTGAGGGC AGAATTGTCC AGGCCAGTGT TCGGAGATTG CAGAATGGAA GAGCCATATG TGTATTAGAT TCTGGGTTAA CTGGGATGCT TATGAAGGAA GATTTCTCAG ATGATGGGAG AGATATTGTT GACTTGGCGG ACCAACTGAA AGAAGGCGAT ATCCTAACAT GCAAGATCAA ATCGATTCAA AAGCAGAGGT ATCAAGTGTT CCTTATTTGC AAAGAAAGTG AAATGAGAAA CAACAGACAC CAGCATAACC AGAATGTGGA TGCTTATTAC CATGAGGATA GAAACAGTCT CCAGCTTGTA AAAGAGAAAG CTCGAAAGGA AAAAGAGCTG GTGAGGAAGC ATTTTAAGTC TCGGATGATT GTCCATCCCC GCTTTCAGAA TATCACAGCT GACCAAGCAA CAGAGTATTT GTCTGACAAA GACTTTGGAG AAAGCATTGT TCGTCCAAGT TCTCGAGGAC TCAACTTTTT AACTTTGACG CTCAAGATTT ATGATGGAGT TTACGCTCAC AAGGAGATAG CTGAAGGTGG GAAAGAAAAC AAGGACATCA CAAGCCTACA GTGTATTGGG AAGACCCTGA CAATTGGAGA GGACACCTTC GAGGATCTAG ATGAGGTCAT GGATCGATAT GTTGATCCTT TGGTATCTCA TCTTAAGACC ATGCTCAACT ATCGGAAATT CCGAAAGGGG TCCAAATCAG AAGTAGATGA TCTTCTTAGG ATCGAGAAGG GAGAAAATCC TTCAAGAATA GTTTACTGTT TTGGGATTTC ACATGAACAT CCAGGCACTT TTATTCTGTC TTACATAAGG AGCACAAACC CACATCATGA GTATATAGGT TTATATCCCA AGGGATTTAA GTTCAGGAAA AGGATGTTTG AGGACATTGA TAGGCTTGTG GCATACTTCC AGAGGCATAT TGATGACCCA TTGCAAGAAT CGGTGCCATC GCTCAGGTCT ATTGCTGCCA AGGTACCGAT GAGAAGCCCA GCAGACCATG GCTCGTCTGG AGGAAGTGAT TGGGGTAGTT CTCAGAATGA AGGAGGGTGG AAAGGAGGCT CAGGTAATGC ATTTCAAAGG AGGGGTGGTG AGTATAGAAA TGGTGGTGGA CGTGATGGAC ATCCAAGTGG AGCGCCTAGG CCATATGGTG GCCGTGGACG TGGTCGAGGC AGAGGACGGA GGGATGATAT GAATAGTGAT AGACAAGATG GTAATGGAGA TTGGGGTAAT AATGATACTG GAACTGGTGA TGGAGGTTGG GGAAGTAGTG GTGTCGGCGC TTGGGGAAGC GAGTCTGCTG GTAAAAAGAG TGGTGGTGCA GGGAGCTGGG GTAGTGAGTC TGGCGGCGGT GGTGGTGGTG TNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNCAAG GCAGGACATA ATAATAACAC ATTAGTAGTA A |
| Length | 4961 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 8838171.. 8845272 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G65440.1 |
| Description | global transcription factor group B1 |
| TAIR curator summary | Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly. |
| Alias | [GTB1][global transcription factor group B1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.69042 |
Ahg473467 | RING/FYVE/PHD zinc finger superfamily protein |
| 8.66025 |
Ahg485488 | Protein phosphatase 2C family protein |
| 9.94987 |
Ahg476840 | eukaryotic translation initiation factor 2 (eIF-2) family protein |
| 12.1655 |
Ahg482124 | glucan synthase-like 3 |
| 12.2474 |
Ahg495982 | RAN binding protein 1 |
| 15.2971 |
Ahg916985 | |
| 16.2788 |
Ahg472338 | squamosa promoter binding protein-like 14 |
| 16.9115 |
Ahg948265 | Basic helix-loop-helix (bHLH) DNA-binding family protein |
| 16.9706 |
Ahg478733 | evolutionarily conserved C-terminal region 2 |
| 16.9706 |
Ahg488046 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|