Detail



ID : Ahg948265

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948265|scaffold_800152.1
Sequence
TTTTACCGGC GGATGTTCAC ATGAACGGCA CAACATCATC AATCAACTTC TTAACCTCCG ACGATGACGC GTCGGCGGCT ATGGAAGCTT TCATCGGAAC AAACCACCAC TCATCTCTCT TTCCTCCACC ACCACAACCA CCACCACCAC CTTCTTTTCC TCAAACTCAA TTCAACGAAG ATACTCTTCA ACAACGTCTC CAAGCTTTAA TCGAATCCGC CGGAGAAAAC TGGACTTACG CTATCTTCTG GCAGATCTCA CACGACTTCG ATTCTTCCAC CGGAGACAAC ACTGTAATCC TCGGCTGGGG AGATGGATAC TACAAAGGAG AAGAAGACAA AGAGAAGAAG AAGAACAACG CGAACACGGC GGAGCAAGAG CACCGGAAAA GAGTAATCCG TGAGCTTAAT TCGTTAATCT CCGGCGGAAT TGGAGTTTCC GATGAATCAA ACGATGAAGA AGTAACAGAT ACTGAATGGT TCTTCTTAGT TTCGATGACT CAAAGCTTCG TTAACGGTGT TGGACTTCCC GGAGAATCTT TCTTAAACTC TCGTGTGATT TGGTTATCTG GGTCGGGTTC TTTAACCGGG TCGGGTTGTG AAAGAGCGGG TCAAGGTCAG ATTTACGGGT TGAAGACGAT GGTGTGTATC GCGACGCAAA ACGGCGTCGT TGAGCTTGGT TCGTCGGAAG TTATAAGTCA AAGCTCAGAT CTGATGGATA AAGTTAATAA CTTGTTTAAC TTCAACAACG GTGGTAGTGG TAACAATGGT GGTGAAGCTT CTTCTTGGGG TTTTAATCTG AATCCAGATC AAGGAGAGAA TGATCCAGCT TTGTGGATTA GTGAACCGAC GAACACCGGA ATCGAATCTC CGGCGAGGGT TAGTAATGGT AATAACTCGA ATTCGAATTC TAAGTCTGAT TCTCATCAAA TTTCGAAGCT TGATAAGAAT GATATTAGCT CTGTGGAGAA TCAGAATCGT CAAAGTTCTT GTCTTGTTGA GAGAGATTTG AATTTCTCGA GCTCTGGGTT GAATCAAAAT GGGAACTTTC AAGGTGGGTT GTTGAAATCG AATGAGACTT TGAGTTTCTG TGGTAACGAG AGTAGCAAGA AGAGGTCTCC GGTTTCGAAA GGGAGTAATA ATGATGAAGG GATGCTTTCT TTTAGTACTG TGGTTCGATC CGCTGCGAAA TCGGTTGATT CGGATCATTC TGATCTTGAA GCATCGGTTG TTAAGGAAGC GATTGTTGTT GAGCCACCGG AGAAGAAGCC GAGGAAACGG GGGAGGAAAC CGGCGAATGG GAGAGAAGAG CCGTTGAATC ATGTTGAAGC AGAGAGGCAG AGAAGAGAGA AGTTAAACCA GAGATTTTAT TCTTTGAGAG CTGTGGTTCC TAATGTTTCG AAGATGGATA AAGCTTCTCT TCTCGGAGAT GCTATTTCGT ATATCAATGA GCTTAAGTCG AAGCTGCAAC AAGCGGAATC TGATAAAGAG GAGATTCAGA AGAAGCTAGA TGGGATGAGT AAGGAAGGAA ATAATGGGAA AGGTGGCGGG TCGAGGGCGA AAGAACGGAA AAGTTCGAAT CAAGATTCTA CGGCGAGTTC TATAGAAATG GAGATTGATG TGAAGATCAT AGGTTGGGAT GTGATGATAC GTGTACAATG CAGCAAGAAG GATCATCCCG GTGCTAGATT CATGGAAGCG CTCAAGGAAC TGGATTTGGA AGTGAATCAC GCGAGTTTAT CCGTTGTGAA TGATTTGATG ATTCAACAAG CTACCGTGAA GATGGGGAGC CAGTTTTTCA ATCATGACCA GCTTAAAGTT GCTTTAATGA CGAAAGTCGG AGAAAACTAT TGAACAAAGT CGGCATGTTA AAGAGATGAA ACTAGTGTTT TCATCGATCG AATTTAGCGG GTTAATGTAT GGTCTTTTGT AAGTAGTAAG TACTCATTTT GCATCACTCG CTTCATGTTG TTAAATGTTG TTGTTC 
Length1986
Protein Sequence
Protein Residue
Map Locationscaffold_8: 712180.. 714167
Download Sequence
A.thaliana
AGI-codeAT5G46760.1
DescriptionBasic helix-loop-helix (bHLH) DNA-binding family protein
TAIR curator summary
Alias[MYC3]
Gene coexpression
MR
MR Locus Description
2 Ahg920751 HCP-like superfamily protein
3.16228 Ahg495549 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
6.32456 Ahg919597 fatty acyl-ACP thioesterases B
6.7082 Ahg471986 D-3-phosphoglycerate dehydrogenase
8.12404 Ahg476140
8.48528 Ahg475854 aldehyde dehydrogenase 3H1
8.83176 Ahg478454 Clathrin, heavy chain
9 Ahg488863 staurosporin and temperature sensitive 3-like A
10.583 Ahg475309
11.6619 Ahg939906 clathrin adaptor complexes medium subunit family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression