Detail



ID : Ahg925928

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925928|scaffold_201489.1
Sequence
TTAAACCTAT CTAATCTACC ATGGCGGCAA AATCCCAGAA AACCCTCATT CTACTAGCAA CTCTAATCAA GGTTCCTCCA CTAAAAGCTT TCTCTCTCTT AAATTCTCCA AATTTCCATG GATTTCAACA CACACACGAA TCCATATCAA TCCTTCTTCG TCTCCTTCTC TCTGGAAACT TATACTCTCA CGCTCAATCA CTTCTCCTTC AAGTAATCTC CGGAAAGATC CAATCCCAAT TCTTCACATC TTCCTCTCTG CTACACTATG TGACAGAATC AGAAACGTCA GAAACCAAGT CTCGTCTCTA CGAGGTAATG ATCAATGCCT ATGTTCAATC TCAATCCCTA GATTCCTCAA TCTCTTACTT CAACGAAATG GTCGATAAGG GTTTTGTTCC TGGATCGAAT TGCTTCAACA ATCTCTTAAC TTTCGTTGTT GGGTCTTCTT CTTTCAATCA ATGGTGGCGT TTCTTCAACG AGAGCAAAAT CAAAGTTGAT TTAGATGTGT ATAGCTTTGG GATTGTGATC AAAGGTTGTT GTGAAGCTGG TGAGATTGAG AAAAGTTTTG ATCTTCTTGT TGAATTAAGA GAGTTTGGGT TTTCTCCAAA CGTTGTTATC TACACTACTT TGATTGATGG GTGTTGCAAG AGAGGAGAGA TTGAGAAGGC GAAAGATTTG TTTTTTGAGA TGGGGAAGTT CGGATTAGTG GCTAATGAAT GGACTTACAC GGTTTTGATT CATGGGTTAT TCAAAAATGG GATTAAGAAA CAAGGGTTTG AGATGTACGA GAAGATGCAG GAAGATGGTG TTTTCCCTAA TCTCTATACT TATAACTGCG TGATGAATCA GCTTTGTAAA GATGGAAGAA CTAAAGATGC GTTTAAACTG TTCGACGAAA TGCGTGAGAG AGGAGTTTCT TGTAACATTG TTACTTATAA TACTTTGATT GGTGGGTTAT GTAGAGAGAT GAAGGCGAAT GAAGCTAATA AGGTTATGGA TCAAATGAAG AGTGATGGAA TCAACCCGAA TCTGATTACG TATAACACTT TGATTGATGG GTTTTGTGGC GTGGGAAAAT TGGGGAAGGC GTTGAGTTTA TGCAGAGATT TGAAGTCAAG AGGTCTGTCT CCGTCTCTTG TCACGTATAA TATTCTAGTT TCCGGGTTTT GTAAGAAAGG GGATACTTCA GGAGCAGGTA AGGTGGTTAA GGAGATGGAA GAGAGAGGGA TTAAACCGTC GAAAATAACA TACACGATAC TTATCGACAC ATTTGCTCGT ATGGATAACA TGGAGAAAGC AATTCAGCTT CGATCATCAA TGGAGGAACT CGGTTTAACC CCGGATGTTC ATACCTATAG TGTATTGATT CATGGGTTTT GCATCAAAGG TCAAATGAAT GAAGCATCGA GGCTTTTTAA GTTGATGGTC GCAAAGAAGT TAGAACCGAA CAAAGTGATA TACAATACAA TGGTTCTCGG GTACTGCAAG GAAGGTAGTT CTTATAGAGC ATTGAGGTTG TTCAGGGAGA TGGAAGAGAA AGAGTTGCCT CCAAATGTTG CTAGCTATAG ATATATGATT GAAGTTCTTT GTAAAGAACG AAAATCGAAA GAAGCTGAGG GTTTGGTTGA GAAGATGATT GATACAGGGA TTGATCCATC TGATTCAATC CTTAATTTGA TCTCTAGAGC CAAAAATGAT TCACATGTAA GCTCAAATAA TGATTAGAGC AGTTTGAATC TGAACGT 
Length1747
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11312407.. 11314153
Download Sequence
A.thaliana
AGI-codeAT4G11690.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.8628 Ahg482514 basic pentacysteine 7
16.1555 Ahg947406 Pentatricopeptide repeat (PPR-like) superfamily protein
32.078 Ahg935484
43.7264 Ahg941312 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
62.49 Ahg496513 Ribosomal protein S21 family protein
68.7459 Ahg338172 Mitochondrial transcription termination factor family protein
77.0454 Ahg936948
92.0923 Ahg326985 NOP56-like pre RNA processing ribonucleoprotein
97.391 Ahg339164 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression