Detail


ID : Ahg941312

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941312|scaffold_601856.1
Sequence
GTTTTCATAA GAAAAAACAA AATGGCAACA ACTCGGAAGT TGGTCGTAGA AGTAGTAGAC GCAAAGGATC TTACACCAAA AGACGGCCAT GGAACGTCAA GCCCGTACGT TATTGTCGAC TATTACGGCC AAAGACGACG AACACGAACC ATAGTCCGTG ACTTAAACCC TGTTTGGAAC GAGACACTCG AGTTCAGTCT TGCGAAGCGA CCTTCTCATC AGCTCTTTGC CGATGTTCTT GAGCTTGACA TGTACCATGA CAAGAACTTT GGTCAAACAC GGAGGAACAA TTTTCTCGGT AGGATCCGAC TTGGGCCCGA TCAGTTTGTT GGTAAAGGAG AAGAGGCTTT GATATATTAT CCTTTGGAGA AGAAGAGTTT GTTTAATCTT GTGCAAGGTG AGATTGGTCT TAGGGTTTAC TACGCCGATG AAAAGCCTCC TCCTTTGAAA CCGACGGTAG CTCCTCTTGA GACGGTGGTG GAGGAAAAGA CGGAGGAGAC GACGGCAGAC GGTCCAGACA AGTCTCAGCC ACCACCAGAG ACTAATGATG ATCCTGCTGA AGTTAAAGAA ACCCCGGAAC CACCTCAACC GCCACCGGAG GAGAATTCGC CAGCCGAGGG TCTCAAGCCA AACGAGGAAG CCTCACCACC GTTACAAGAA AATGCTACGG TTGGTGGAGA AGAACCAGCG GCGTCGGAAC CAACTCTGCC ACCGGAATCA GATAAGAATG AAGCAGACGT GAAACCGGTG GAAGAGCCAC CGCAGAACCA ACCAGACGGT GAAGATGTTG TACTTGAGTC AGAAGATTCA ATGAGCTGGG CTTCGGCGCC GCGATCACCG GAAGTTATCA TTTCAAGATC TGTCTCCGGT TCCATACCAG AAATCAAAAA CGGACCACAA CCACTACGGA GAAGCGTATC GGAAACAGCC AGCTACACAT CAGAGATCTC CGACGTGTCA ACGATAGAAC GATCCACGTT TGATTTGGTG GAGAAAATGC ATTACGTCTT CGTCCGCGTC GTGAAAGCTC GGTCTTTACC AACCTCCGGA AGTCCAGTCA CAAAGATCTC ACTCTCCGGC ACAATGATCC AATCAAAACC CGCCAGAAAA ACCTCTTGCT TCGAGTGGGA TCAAACCTTT GCCTTCCTCC GTGACTCACC GGATTTATCT TCTTCTCCAA TTCTAGAGAT CTCCGTGTGG GATTCATCGA CGGAAATCGA AACTAGCCAA TTCCTCGGTG GAATTTGCTT TGACGTGTCA GAGATTCCGC TCCGAGATCC ACCGGATAGT CCATTAGCAC CGCAATGGTA CCGTCTCGAA GGAGGTGGAG CTCACAACAG TGATCTAATG CTGGCCACGT GGACAGGAAC TCAAGCAGAC GAATCATTTC CCGACGCTTG GAAAACAGAT ACCGCCGGAA ACGTAACCGC TCGAGCGAAA GTTTACATGT CGTCGAAGCT GTGGTATCTA CGCGCCACCG TAATCGAAGC TCAAGACTTG TTACCGCCAC AGTTAACGGC GTTTAAAGAA GCGTCGTTTC AATTAAAAGC TCAGCTAGGT TTCCAAGTGC AGAAAACCAA ATCCGCCGTT ACTCGTAATG GCGCGCCGTC ATGGAACGAA GATCTACTCT TCGTAGCCGC CGAGCCTTTC TCCGATCAGC TAGTTTTCAC ACTGGAGTAT CGAACATCGA AAGGGCCAGT CACCGTCGGT ATGGCGCGCG TGCCTCTCAC TTCAATCGAG AGACGCGTCG ATGATCGTTT GGTGGCTTCG AGATGGTTCG GATTCGAAGA TCCAAACGAC GAGAAAAGAG GAAACAGATC TAGAGTACAT CTGAGACTCT GTTTCGACGG TGGTTATCAC GTGATGGACG AGGCGGTACA CGTGTGCAGC GATTACCGGC CTACGGCGAG GCAGTTATGG AAACCGGCGG TAGGAATCGT CGAGCTCGGT ATAATCGGTT GCAAGAATCT GTTACCGATG AAGACGGTGA ACGGAAAAGG TTCCACGGAT GCGTACACGG TGGCGAAATA CGGTACTAAA TGGGTCCGTA CCCGAACCGT ATCGGATTCT TTAGATCCGA AATGGAACGA ACAGTACACG TGGAAAGTAT ACGATCCGTG TACGGTTTTG ACGATTGGAG TCTTCGATAG CTGGGGAGTA TTCGAAATCA ACAGTGGAAA AGAAGCCACG CGTCAGGATC TCCGTATCGG GAAAGTTCGT ATACGTATAT CTACGCTGGA GACTGGTAAA GCGTATAGAA ATACGTATCC GCTTCTGATG TTAGTTAACG GCGGTGTTAA AAAACTGGGA GAGATAGAAT TGGCCGTTAG ATTCGTGAGA TCAGCTCCAC CGTTGGATTT CTTACACGTG TATACTCAAC CGTTATTGCC TTTGATGCAT CACATTAAAC CGTTGAGTTT GATTCAAGAA GAGATGTTGA GGAACGCTGC CGTGAGGATC TTGGCTGCCC ATTTGTCACG ATCTGAGCCG CCTTTAAGGC CGGAGATCGT ACGGTACATG CTCGACGCCG ATTCTCACAC TTTCAGTATG CGTAAAGTCC GAGCAAATTG GCTCCGCATT GTTAACGTGG TCGCCGGAAT GGTCGACATA GTGCGGTGGG TGGATGACAC ACGTTTCTGG AAGAATCCGA CATCTACTTT ACTAGTTCAC GCTCTTGTCG TGATGCTGAT ATGGTTCCCT GATCTCATTG TTCCCACATT AGCGTTTTAC TTGTTCGTGA TCGGCGCGTG GAATTACAGA TTCAGGTCAC GTGCTGCTCT TCCTCACTTT GATCCAAGAC TCTCGTTGGC TGATGCAGCC GATAGAGAAG AGCTTGACGA GGAGTTTGAC GTCGTCCCGA GCAACCGGCC GCCGGAGATG GTTCGGTTGA GGTACGATAA GCTACGAAAT GTCGGAGCTC GAGTTCAGAC GATTCTTGGT GAAGTAGCGT CTCAAGGAGA GAAAATGCAA GCTTTGGTGA CGTGGCGAGA CCCACGAGCG ACGGGTATAT TCGTGGGGCT GTGTTTATTT GTGGCGTTGG TGTTGTATCT TGTGCCGACG AAGATGGTGG CTATGGCGTC AGGGTTTTAT TACTTCCGGC ATCCTATATT CCGTGACCGG AAACCTTCGC CGGTGTTAAA CTTCTTCCGG CGACTACCTT CGTTATCTGA TCGGCTCATG TGATCTTCGT GTTTTTTTGA AGCT
Length3204
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7112172.. 7115368
Download Sequence
A.thaliana
AGI-codeAT5G17980.1
DescriptionC2 calcium/lipid-binding plant phosphoribosyltransferase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.6132 Ahg918994 Transcription factor TFIIE, alpha subunit
22.7156 Ahg496305 P-loop containing nucleoside triphosphate hydrolases superfamily protein
29.1719 Ahg927133 transcription coactivators
31.7017 Ahg341309 Sterile alpha motif (SAM) domain-containing protein
33.1059 Ahg943517 xanthine dehydrogenase 1
37.8418 Ahg490295 bZIP transcription factor family protein
43.7264 Ahg925928 Pentatricopeptide repeat (PPR-like) superfamily protein
45.8912 Ahg928719 Calcium-binding EF-hand family protein
45.9891 Ahg479964 heat shock transcription factor C1
49.5782 Ahg924211 Esterase/lipase/thioesterase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression