Detail



ID : Ahg925952

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925952|scaffold_201513.1
Sequence
TTCGGAAATG GTTGAAGTAG ATGAATAGGA GGATCGCTAT GACTATAGCC CTTGGTAAAT TTACCAAAGA CGAAAAAGAT TTATTTGATA TTATGGATGA CTGGTTACGG AGGGACCGCT TCGTTTTTGT AGGTTGGTCT GGTCTATTGC TCTTTCCTTG TGCCTATTTC GCTTTAGGGG GTTGGTTCAC AGGTACAACC TTTGTAACTT CATGGTATAC TCATGGATTG TTTCTACTCC TGCTACTCCT ACTGTGGGGT CCTGAAGCAC AAGGAGATTT TACTCGTTGG TGTCAATTAG GTGGTCTATG GGCTTTTGTT GCTCTCCACG GCGCTTTCGC ATTAATAGGT TTTATGTTAC GTCAATTTGA ACTTGCTCGA TCTGTTCAAT TGCGACCATA TAATGCAATC GCATTCTCTG GTCCCATTGC TGTTTTTGTT TCTGTCTTCC TAATTTATCC ACTAGGTCAA TCTGGTTGGT TCTTTGCGCC TAGTTTTGGT GTAGCGGCTA TATTTCGATT CATCCTCTTT TTCCAAGGGT TTCATAATTG GACATTGAAC CCATTTCATA TGATGGGAGT CGCCGGTGTA CTTGGCGCGG CTCTGCTATG CGCTATTCAT GTTGCTACTG TAGAAAATAC TTTATTTGAA GATGGTGATG GTGCAAATAC ATTCCGTGCT TTTAACCCAA CTCAAGCCGA AGAAACTTAT TCAATGGTCA CCGCTAACCG CTTTTGGTCA CAAATCTTTG GGGTTGCTTT TTCCAATAAA CGTTGGTTAC ATTTCTTTAT GTTATTTGTA CCGGTAACTG GTTTATGGAT GAGTGCTCTT GGAGTAGTCG GTCTAGCTTT GAACCTACGT GCCTATGACT TTGTTTCCCA GGAAATCCGT GCAGCGGAAG ATC 
Length903
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11484038.. 11484983
Download Sequence
A.thaliana
AGI-codeATCG00270.1
Descriptionphotosystem II reaction center protein D
TAIR curator summaryPSII D2 protein
Alias[PSBD][photosystem II reaction center protein D]
Gene coexpression
MR
MR Locus Description
1 Ahg925482
1.41421 Ahg315523 photosystem II reaction center protein D
10.7703 Ahg925483 photosystem II reaction center protein M
10.9545 Ahg475583 ATPase, F0 complex, subunit B/B', bacterial/chloroplast
15.0997 Ahg486064 copper chaperone
15.3948 Ahg936547 monodehydroascorbate reductase 4
16.1245 Ahg925873 BURP domain-containing protein
17.4929 Ahg952677 ribosomal protein L32
19.2614 Ahg490488 TRAF-like family protein
20.1246 Ahg925462 photosystem II reaction center protein J
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression