Detail


ID : Ahg315523

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315523|fgenesh1_pm.C_scaffold_2000556
Sequence
ATGACTATAG CCCTTGGTAA ATTTACCAAA GACGAAAAAG ATTTATTTGA TATTATGGAT GACTGGTTAC GGAGGGACCG CTTCGTTTTT GTAGGTTGGT CTGGTCTATT GCTCTTTCCT TGTGCCTATT TCGCTTTAGG GGGTTGGTTC ACAGGTACAA CCTTTGTAAC TTCATGGTAT ACTCATGGAT TGGCCAGTTC CTATTTAGAA GGTTGCAATT TTTTAACCGC TGCAGTTTCT ACTCCTGCTA ATAGTTTAGC GCATTCTTTG TTGTTACTGT GGGGTCCTGA AGCACAAGGA GATTTTACTC GTTGGTGTCA ATTAGGTGGT CTATGGGCTT TTGTTGCTCT CCACGGCGCT TTCGCATTAA TAGGTTTTAT GTTACGTCAA TTTGAACTTG CTCGATCTGT TCAATTGCGA CCTTATAATG CAATCGCATT CTCTGGTCCC ATTGCTGTTT TTGTTTCTGT CTTCCTAATT TATCCACTAG GTCAATCTGG TTGGTTCTTT GCGCCTAGTT TTGGTGTAGC GGCTATATTT CGATTCATCC TCTTTTTCCA AGGGTTTCAT AATTGGACAT TGAACCCATT TCATATGATG GGAGTCGCCG GTGTACTGGG CGCGGCTCTG CTATGCGCTA TTCATGGTGC TACTGTAGAA AATACTTTAT TTGAAGATGG TGATGGTGCA AATACATTCC GTGCTTTTAA CCCAACTCAA GCCGAAGAAA CTTATTCAAT GGTCACCGCT AACCGCTTTT GGTCACAAAT CTTTGGGGTT GCTTTTTCCA ATAAACGTTG GTTACATTTC TTTATGTTAT TTGTACCGGT AACTGGTTTA TGGATGAGTG CTCTTGGAGT AGTCGGTCTA GCTTTGAACC TACGTGCCTA TGACTTCGTT TCCCAGGAAA TCCGTGCAGC GGAAGATCCA GAATTTGAGA CTTTCTATAC TAAAAATATT CTTTTAAACG AAGGTATTCG TGCTTGGATG GCGGCTCAAG ATCAGCCTCA TGAAAACCTT ATATTCCCTG AGGAGGTTCT ACCACGTGGA AACGCTCTTT AA
Length1062
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8228312.. 8229373
Download Sequence
A.thaliana
AGI-codeATCG00270.1
Descriptionphotosystem II reaction center protein D
TAIR curator summaryPSII D2 protein
Alias[PSBD][photosystem II reaction center protein D]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg925952 photosystem II reaction center protein D
1.73205 Ahg475572 photosystem II reaction center protein C
3.16228 Ahg925482
4.24264 Ahg925953 photosystem II reaction center protein C
12.49 Ahg490638 rotamase CYP 1
26.7208 Ahg887449 photosystem II reaction center protein A
29.5466 Ahg479701 UDP-Glycosyltransferase superfamily protein
33.5857 Ahg907877 NADH dehydrogenase subunit J
40.9756 Ahg486598 NAD(P)-binding Rossmann-fold superfamily protein
43.6234 Ahg908288 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression