| Annotation |
|---|
| Description | jgi|Araly1|926054|scaffold_201615.1 |
| Sequence |
TTCACTGTCG TCTTCCGTAG TGATGCTTCT TTCTGCAATC GCTTCTCAGA CCCTTCTCTC ATCAAACCCT AATCTACACT TCTCCAATTC TATTCCAAAC CCTAGACCTT CTAATCCCTC CCTTAAGCTC CTCAATGCCT CTTCCTCTTC CTCTTCGTCG TCTTCTATAT TTACTCGCGG TCTCCGTTAC GTGAACCACA CTGTATCCAA TGAAGAATCA GAACCCGGAG GAGGAGAGAC CATGGTGGCT TCTGCCTCCG CTATAGCTTC CGCGATTCGT GGAGCTTCAA CGACTCCTGT AGAGTTCACA CAGATGATTG AGAAAGACCA TCTCAAGACG AAGATTATCT TGCCAAGTCC TGATTTTCAA CGTCTTTGTC TCGAGCAATT AGATCTCTTT CGTCAAATCG TGGATCCAAA CGCAGTCCTC TCGATATATG TAAGACCAGC TGGTAGCTAT GTGATGGATC GATTAGAGCT ACGTCGTGTC ACTTGTTACC CGAGTGTTAG TGCTGGAGAC GTTGTGATCT TAGTCGGAAA CTTTGGTATC CCCGCCGGTC TTCGAGCTGC TGAAGCATCA CTTTCTAGTC AACAAGTAGA ACTTGTGAAC AAACATAGAG CTGCTGTGTT TCCGATGGTG AAACATCCGT TTGTTGTCGG TTTCTTGGTT GCTGAGTTAC CGGTAGAAGC TGAGGAGGAG GAGGAGGAGG AGAAGGAAGA GGAAAAACTG CATGGTTTGA AGCATTTTCC TTCCCCTGAG GAAGCTTATG CTTTGCCTGC TTCAGCTAAT ACAAAATCAC CTAAAGTTAA ACGTCCTTCT GTTAAGGTTT TCACTGCAGA GCAGAGATCT TATGCCATTA ATATTTCGCG GACTCTCGCT ATGGCTTATG TCATGGATCA GAAAACGATG TTACTTCAAC AGTCATCTTG GCAAAACAAT GTGAGGATGA GTAAGCTAGT GGAGCAGATC CGTGGTCCGC TCTCTACCAT CAGGACTTTA AGTAAAATGC TTTCAACTCA CACTAAGAGA AATCAGATTT CACATGATAT TGTCGAAGAC TTAATAGTTC AAGGCGATCA AATAAAAGAT ACCCTTGAAG AACTTCAGGA TGCAGTTCAC TTGACAAAGG CTAATATAGT CCGCCATAAT GAAGAAGCCC TAAAGAAGAT AAACAAAACA CATAATGAAA CAAGGAGATC AAACTATGAA CATAAGGACC CCATTGATGG GTCAAAAATC CCAAGTACAC GCCTTTCCCT GGGTTCTGGA TCAAATGATT CAGAAATGCC TATGCCACCT CTGGCCCTGG CACCCTTACA AACACACAAC ATAAGACCAT GCGACATTTC TTATGTGCTT TTAGATATGG TCGATACTGT GAGACCACTT GCCCTTACTC AGCAAAGAGT GGTGGAGCTA GGTGAGAACT CAGCTTCCCT GCAAGTTGCT GTTGAAGAAC CGGCTTTGAG GCAGGCTCTG AGCAACCTCA TTGAAGGTGC ACTGTTGCGC ACTCATGTTG GGGGAAAAGT TGAAATTCTG TCAACCAGAG CTCCTGCTGG CGGTAGTCTG GTAGTAATTG ATGATGATGG TCCTGATATG CGCTATATGA CGCAAATGCA TTCGCTGACA CCATTTGGAG CAGAACTCCT TTCGGAAAAC ATGGTTGAAG ACAATATGAC ATGGAACTTT GTGGCTGGGT TAACCGTAGC CCGAGAGATC CTGGAGAGTT ACGGATGTGT GATCAGGGTT ATATCACCTC GCAGTTCCGA TGCAGCCTTA GGAGCTGGTG GTACTCGTGT AGAGCTCTGG CTGCCTGCCT TCCCTGCAGC AGTATCTGAA GCCAATGAAG CATAGGCTTC ATTCCCTCTC TTTCTG |
| Length | 1876 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 11987291.. 11990000 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G67840.1 |
| Description | chloroplast sensor kinase |
| TAIR curator summary | Encodes a chloroplast sensor kinase (CSK) that shares common ancestors with cyanobacterial histidine sensor kinases. CSK is synthesised in the cytosol and imported into the chloroplast as a protein precusor. CSK is autophosphorylated and required for control of transcription of chloroplast genes by the redox state of an electron carrier connecting photosystems I and II. |
| Alias | [CSK][chloroplast sensor kinase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg483355 | general regulatory factor 9 |
| 19.0788 |
Ahg482029 | ATP synthase protein I -related |
| 21.2132 |
Ahg471925 | Translation initiation factor 2, small GTP-binding protein |
| 22.4499 |
Ahg473161 | |
| 25.219 |
Ahg909440 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 29.6311 |
Ahg487193 | glutamate synthase 1 |
| 30.3974 |
Ahg947004 | acyl-activating enzyme 15 |
| 30.5123 |
Ahg492262 | ACD1-like |
| 31.225 |
Ahg484330 | Hydroxyproline-rich glycoprotein family protein |
| 32.9848 |
Ahg494103 | acclimation of photosynthesis to environment |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|