| Annotation |
|---|
| Description | jgi|Araly1|487193|fgenesh2_kg.6__327__AT5G04140.1 |
| Sequence |
GAAACAGAGA AAAGGAAAGA AAGAGAGAAG AAGAAGCTCT CATCACTCAT CTGTTATCTT CCTCCTCTTC TTCTTCTTCC TCTTCTTTTT TTTTTTTTTA TCTTTATTTA TTTTATTTTT TAGTGTGCAT TTATCTTATT TTCCACACAC GCCTCTCATT TTTTTTCATT TCAATGGCGA TGAAATCTCT TTCCCCTGTT CCTAAGCTTC TCTCCACAAC ACCAAGCTCT GTTCTTTCTT CTGACAAGAA CTTCTTCTTC GTCGATTTCG TTGGATTATA CTGTAAGTCC AAGAGAACCA GACGCAGACT TCGTGGCGAT TCTTCCTCAG GCTCTTCTTC TTCTTCTCTC TCTCGTCTTT CCTCTGTTCG TGCTGTTATC GACCTTGAAC GTGTTAATGG CTTCTCTCAC AAAGATCTCT CTTCTCCTTC ACTTTTAAAA CCTCAGGTTG CTAATTTGGA GGATATATTG TCTGAAAGAG GAGCTTGTGG AGTTGGGTTT ATAGCAAACT TAGATAACAT ACCTTCACAT GGAGTTGTCA AAGATGCTCT TATTGCTCTT GGTTGTATGG AACATCGTGG AGGTTGTGGA GCTGACAATG ATTCTGGTGA TGGCTCTGGT CTTATGTCTT CCATTCCTTG GGATTTCTTT AACGTCTGGG CCAAGGAACA AGGTCTTTCT CCTTTTGATA AGTTGCATAC TGGTGTTGGC ATGATCTTTC TTCCACAAGA GGATACCTTT ATGCAAGAAG CCAAACAAGT TATTGAAAAC ATATTTGAGA AAGAAGGATT ACAAGTTCTT GGGTGGAGGG AAGTTCCTGT GAATGTTCCT ATAGTTGGTC AAAATGCTAG GGAAACAATG CCTAACATTC AACAAGTGTT TGTCAAAATC GCAAAGGAAG ATAGTACGGA TGATATTGAA AGGGAACTTT ACATATGCCG GAAACTAATC GAAAGGGCGG TGGCTACTGA GAGTTGGGGA ACAGAGCTAT ACTTCTGTTC ACTGTCCAAT CAAACCATAG TGTACAAGGG CATGCTTCGG TCCGAAGCTC TTGGATTGTT TTATCTAGAT CTTCAGAATG AGCTTTATGA GTCTCCTTTT GCTATTTATC ATCGAAGGTA CAGTACAAAC ACTAGTCCTA GGTGGCCTCT TGCTCAACCA ATGAGGTTTC TTGGACATAA CGGAGAGATC AATACCATAC AGGGGAACTT AAATTGGATG CAGTCTCGAG AAGCTTCTTT GAAGTCCTCT GTTTGGAATG GCCGTGAAAA TGAAATCCGT CCGTTTGGTA ATCCCAGGGG TTCAGACTCT GCTAATCTTG ATAGTGCTGC AGAAATCTTG ATTAGAAGTG GCCGTACTCC AGAGGAAGCT CTAATGATTC TTGTCCCTGA GGCATACAAA AATCATCCAA CCTTATCTGT CAAATATCCT GAGGTTATAG ATTTCTATGA CTACTACAAA GGACAAATGG AGGCTTGGGA TGGTCCTGCC TTACTTTTGT TCAGTGATGG AAAAACAGTT GGGGCTTGTC TTGACCGTAA CGGCCTTCGT CCTGCTCGAT ATTGGCGGAC TAGTGACAAT GTCGTCTATG TAGCATCTGA GGTCGGAGTT GTACCAGTTG ATGAAGCGAA AGTCACAATG AAAGGCCGTC TAGGACCTGG AATGATGATT GCTGTTGACC TAGTGAATGG CCAGGTATAT GAGAACACAG AGGTCAAGAA GAGGATATCT TCATTTAATC CATATGGAAA ATGGATTAAA GAAAACCCCC GGTTCTTGAA GCCTGTGAAT TTCAAATCCT CAACTGTCAT GGAAAATGAA GAAATCTTAA GAAGCCAACA GGCATTTGGT TATTCAAGTG AGGATGTGCA AATGGTTATT GAGTCTATGG CTTCTCAAGG AAAGGAACCA ACCTTCTGCA TGGGCGATGA TATTCCGCTG GCAGGATTGT CTCAAAGACC ACACATGCTT TACGATTATT TCAAACAAAG ATTTGCGCAG GTTACAAACC CTGCCATTGA TCCCCTTAGG GAAGGTTTGG TTATGTCTCT TGAAGTAAAT ATTGGAAAAC GTGGAAATAT ATTGGAGCTT GGACCTGAGA ATGCCTCACA GGTTATCCTG TCTAACCCTG TGTTAAACGA AGGAGCGTTG GAGGAGTTAA AGAAGGATAC ATACTTAAAA CCCAAGGTTC TGTCCACATA TTTCGATATA CGAAAAGGAG TTGAAGGTTC CTTGCAAAAG GCTCTATATT ATCTTTGTGA AGCAGCTGAT GATGCTGTCC GAAGTGGCTC TCAGCTTCTC GTTCTTTCAG ACCGATCCGA AAGCCTGGAA CCGACCAGGC CTGCAATTCC GATAATGTTA GCTGTTGGCG CTGTACATCA ACATCTTATT CAGAACGTAT CTTTTGTTTG CTCTGAATTT TCTAAATTTG TCCCTGCCAA TGCTGTATGC CCATACTTGG CACTGGAGAC ATGTAGGCAA TGGCGCTTAA GTAACAAAAC TGTCGCATTC ATGCGTAACG GGAAAATTCC CACTGTAACC ATTGAGCAGG CTCAGAAGAA TTATACCAAG GCGGTTAATG CAGGGCTTCT TAAAATTCTT TCTAAGATGG GCATCTCATT GCTTTCAAGT TATTGTGGTG CTCAGATATT TGAGATATAT GGTTTGGGGA AAGAGGTTGT TGATCTTGCA TTCACTGGAA GTGTGTCAAA AATCAGTGGA CTCACCTTTG ATGAGTTGGC AAGAGAGACA TTGTCTTTCT GGGTGAAGGC CTTTTCTGAG GATACAACTA AACGATTAGA AAATTTCGGG TTTATTCAAT TTAGGCCTGG AGGTGAGTAT CATTCAAACA ACCCAGAGAT GTCAAAGTTG CTCCACAAGG CTGTCCGTGA AAAGAGTGAA ACTGCATATG CAGTCTATCA ACAACATCTC TCTAACAGAC CTGTTAATGT CCTCCGTGAT CTCCTTGAAT TCAAGAGTGA CCGTGCACCG ATCCCAGTAG GGAAAGTTGA ACCAGCCGTT TCTATTGTCC AGAGATTTTG TACTGGTGGA ATGTCACTTG GTGCTATTTC AAGAGAAACT CATGAAGCAA TTGCTATTGC TATGAATAGG ATTGGTGGTA AATCAAACTC TGGAGAAGGT GGAGAGGATC CTATCCGTTG GAAGCCACTT ACAGATGTGG TTGATGGATA TTCATCAACA TTACCACATC TCAAAGGACT TCAAAACGGC GATATCGCAA CAAGTGCTAT CAAGCAGGTT GCTTCAGGAC GTTTTGGAGT CACACCAACA TTCTTGGTGA ATGCAGACCA ATTGGAAATC AAAGTTGCAC AAGGTGCCAA GCCTGGGGAA GGTGGTCAGC TTCCTGGAAA GAAAGTTAGT GCATATATCG CAAGGCTAAG AAGCTCTAAA CCTGGTGTTC CGCTTATATC TCCGCCTCCT CACCACGACA TTTACTCTAT TGAGGATCTT GCTCAGTTGA TCTTTGATCT ACATCAGATT AATCCGAATG CAAAAGTATC AGTCAAGCTG GTCGCAGAAG CTGGAATCGG AACAGTTGCT TCTGGAGTTG CAAAGGGTAA CGCTGATATC ATTCAGATAT CAGGGCATGA TGGTGGAACT GGTGCTAGTC CAATAAGCTC CATAAAACAT GCTGGTGGAC CATGGGAGCT TGGACTAACA GAAACTCACC AAACTCTTAT CGAAAATGGA CTCAGAGAAC GAGTCATTTT AAGAGTCGAT GGAGGCTTAA AGAGTGGTGT TGATGTTCTA ATGGCTGCAG CTATGGGTGC TGATGAATAC GGATTTGGTT CCTTGGCAAT GATTGCTACT GGTTGTGTTA TGGCTCGTAT TTGCCACACT AATAACTGCC CAGTGGGTGT AGCAAGTCAG AGAGAAGAAT TACGTGCAAG ATTCCCCGGT GTGCCTGGTG ATCTTGTCAA TTACTTCTTA TACGTAGCAG AAGAGGTGAG AGGTATCTTA GCACAGTTGG GATACAGCAA GTTAGATGAC ATCATTGGAC GAACAGAGTT ACTGAAACCA CGAGACATTT CGTTAGTGAA AACTCAGCAT CTCGATCTGA GTTATCTTCT TTCGTCTGTT GGAACACCTT CATTGAGCAG TACTGAAATC AGAAAGCAGG AAGTTCATAC AAATGGACCT GTTCTCGACG ACGATATTCT TGCAGATCCA TTGGTGATTG ATGCAATAGA GAACGAAAAG GTGGTCGATA AAACCGTCAA AATATGCAAC GTAGACCGTG CGGTCTGTGG TCGCGTTGCT GGTGTTATCG CAAAGAAGTA TGGAGACACT GGTTTTGCTG GACAAGTGAA TCTAACTTTC CTTGGGAGCG CGGGACAGTC TTTTGGGTGC TTTTTGATTC CCGGTATGAA CATCCGGCTA ATAGGAGAGT CAAATGACTA CGTTGGAAAG GGAATGGCTG GTGGGGAAAT AGTAGTAACT CCTGTGGACA CAATCGGGTT TGTGCCCGAG GAAGCAACGA TAGTCGGGAA CACTTGCTTG TATGGTGCCA CAGGCGGTCA GATATTTGCT AGAGGCAAAG CTGGAGAGAG ATTTGCAGTG AGAAACTCAC TAGCTGAAGC GGTAGTTGAA GGCACTGGAG ACCATTGCTG TGAGTACATG ACTGGTGGTT GTGTCGTCGT GCTTGGAAAG GTGGGAAGGA ACGTTGCTGC GGGTATGACT GGAGGCTTAG CTTACCTTCT TGATGAAGAC GACACTCTTC TCCCTAAGAT TAACAGAGAG ATAGTGAAGA TGCAAAGAGT AGCTGCGCCT GCAGGGGAAT TGCAGCTGAA GAGCTTAATT GAAGCACATG TCGAAAAAAC CGGAAGCAGC AAAGGCGCAA CGATTCTGAA TGAATGGGAC AAGTATCTAC CACTCTTCTG GCAACTGGTT CCACCGAGTG AAGAAGACAC TCCTGAAGCT TCAGCTGCTT ATGTAAGAAC AGCCACCGGC GAAGTCACAT TTCAATCGGC ATAAAGATCA TTCAAGAGAA GGTTGTTGCA GTTGAAACAC AAGGATTGAT ATACATACAT CAATGGTGGA CTATGGAGGA CAAATAGAAA ATCATTATCA TTTCATAGAT CAAATGTGTG AGACAATATT CTTATTGTCT TGTGATCTTT ACAACAATAC CATGGTTGCT ATAACTGTAC AGTAAATTCA GTAAAATAAC TGCTTTCAAC TGTCATAAAA ATTTGCAAAT TCTCTTTATT G |
| Length | 5231 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1286565.. 1295069 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G04140.2 |
| Description | glutamate synthase 1 |
| TAIR curator summary | Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. |
| Alias | [FD-GOGAT][GLS1][GLU1][GLUS][FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE][FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1][glutamate synthase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.69042 |
Ahg473747 | glyceraldehyde-3-phosphate dehydrogenase B subunit |
| 6.16441 |
Ahg490821 | serine transhydroxymethyltransferase 1 |
| 6.48074 |
Ahg496993 | ferredoxin-NADP(+)-oxidoreductase 1 |
| 6.9282 |
Ahg475922 | hydroxypyruvate reductase |
| 7.34847 |
Ahg484330 | Hydroxyproline-rich glycoprotein family protein |
| 8.06226 |
Ahg491390 | glycine decarboxylase P-protein 1 |
| 8.24621 |
Ahg472589 | glutamate:glyoxylate aminotransferase |
| 9.38083 |
Ahg487785 | peroxisomal NAD-malate dehydrogenase 2 |
| 9.79796 |
Ahg478862 | Aldolase-type TIM barrel family protein |
| 10.3441 |
Ahg488578 | rubredoxin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|