| Annotation |
|---|
| Description | jgi|Araly1|484330|fgenesh2_kg.5__322__AT3G25690.1 |
| Sequence |
CTGTAAAGTT TTGTCAGTAC CTGGAAGTTT CTCTTACAGA AGCAAGTGTG TTTATCCATT TGTCATAAGG TTCATGAACA GGATTTGGAC TAGAGATTTT TCTTGAAGGA ACGATGGGTT GAGTTAGTAT CCGTAGAGTG ATATTTTTAA GGAGACTTTC CGGTTCTGTA GATGAGACGG GGAAGGGAAT TTATTCCCAT TTCAAGATTT TAATATATGT TTGTCCGGAT AGGGTTTGTT GTTGCTGCTT CCATTGCAGC AGTTACTGTT AAGCGGCTCA ACGTTAAACC CTCCAAACCG AGCAAACCAT CAGATAATGG CGAAGGAGGT GATAAAGAAC AGTCTGTGGA TCCCGACAAC AATCTCAATG ACAAGAATGT GCAAGAGGAG GAAGAAGAAG AAGAAGAGGT GAAACTAATC AACAGCGTAA TCAATCAGAC TCGTGGAAGT TTCTCGGACT TTTTAGATGA TGATATTTTA CCCGAGTTTG AAGATCTTTT ATCTGGTGAG ATTGAGTATC CATTGCCTGA TGATGATAAT AACTTGGAGA AAGCTGAGAA AGAGAGGAAA TATGAAGTCG AAATGGCGTA TAACGATGGT GAGCTCGAAA GGTTGAAACA GTTAGTTAAG GAGCTAGAAG AAAGAGAAGT GAAACTCGAA GGTGAATTGC TCGAGTATTA TGGACTTAAA GAGCAAGAAT CGGATATAGT TGAGTTACAA AGACAGCTCA AGATCAAGAC TGTTGAGATC GATATGTTAA ACATCACTAT TAATTCTCTG CAAGCTGAGA GGAAAAAGCT TCAAGAAGAG CTCTCACAAA ACGGTATAGT AAGAAAGGAG CTTGAAGTGG CGAGAAACAA GATCAAAGAG TTGCAGAGGC AAATCCAACT CGATGCTAAC CAGACGAAAG GACAGTTACT GTTGCTTAAG CAGCATGTAT CAAGTCTTCA AATGAAAGAA GAAGAAGCTA TGAATAAAGA TACCGAAGTT GAGAGGAAGC TTAAAGCTGT TCAGGATTTG GAAGTGGAAG TTATGGAACT CAAGAGAAAA AACAGAGAGC TTCAATATGA GAAGAGAGAG TTATCCATTA AACTCGATTC AGCGGAAGCA AGAATTGCAA CTCTTTCAAA CATGACCGAG AGCGATAAAG TGGCGAAAGT TAGAGAAGAG GTTAACAATT TGAAGCATAA CAATGAGGAT TTATTAAAGC AAGTTGAAGG GCTTCAAATG AATAGGTTCA GTGAAGTTGA GGAATTGGTT TATCTCCGTT GGGTCAATGC ATGTTTACGG TATGAGTTAA GAAACTACCA GACACCAGCT GGTAAAATCT CAGCTCGTGA CTTAAGCAAG AACCTAAGCC CCAAGTCCCA AGCAAAAGCA AAACGGTTAA TGCTAGAGTA TGCTGGTTCA GAGCGTGGCC AAGGAGATAC CGACTTAGAA AGCAACTACT CTCAACCTTC ATCTCCGGGA AGCGATGATT TCGATAATGC TTCGATGGAT AGTTCCACAA GTAGGTTGAG TAGTTTTAGC AAGAAACCAG GATTGATTCA GAAACTCAAG AGATGGGGCA AAAGCAAGGA TGATTCGAGC GTTCAATCGT CGCCTTCAAG ATCATTCTAT GGAGGATCAC CGGGAAGACT TAGCTCGAGC ATGAATAAAC AGAGAGGTCC TTTAGAATCT TTGATGATTA GAAACGCCGG TGAATCCGTA GCCATAACAA CATTTGGTCA AGTGGATCAA GAATCTCCTG GTACCCCTGA AACACCGAAT CTTCCTAGAA TCCGAACACA ACAACAAGCT TCTTCTCCGG GTGAGGGTTT GAATTCCGTT GCAGCATCGT TCCACGTGAT GTCTAAATCG GTTGACAATG TTTTGGATGA GAAGTATCCT GCGTACAAAG ACAGGCATAA GTTGGCAGTT GAAAGAGAGA AGCACATTAA GCATAAAGCA GATCAAGCGA GAGCAGAGAG ATTTGGCGGT AATGTGGCTT TGCCTCCTAA ACTTGCTCAA CTAAAGGAGA AAAGGGTTGT GGTTCCCTCC GTGATCACAG CCACAGGTGA TCAGTCTAAC GAGTCAAATG AGTCTAACGA AGGTAAAGCC AACGAAAACG CTGCAACCGT AACCAAAATG AAGCTTGTAG ACATTGAGAA ACGACCTCCT AGAGTACCTC GCCCGCCTCC AAGATCATCT GGAGCTGGTA AAAGTACCAC TTTGCCTTCA GCAAGACCTC CCTTACCTGG TGGAGGTCCA CCACCACCTC CTCCACCACC TGGCGGTGGG CCTCCTCCTC CACCTGGTGG TGGGCCGCCG CCACCACCAC CGCCTCCTGG AGCACTTGGA AGAGGAGCGG GAGGCGGCAA CAAAGTTCAC CGAGCTCCTG AGCTTGTTGA GTTTTATCAA TCATTGATGA AACGTGAATC GAAGAAAGAA GGTGCACCTT CTTTGATCTC TTCAGGAACT GGTAATTCAT CAGCAGCTAG GAACAATATG ATTGGGGAAA TCGAGAACCG ATCAACATTC CTCTTAGCAG TAAAAGCGGA TGTGGAGACA CAAGGGGACT TTGTTCAGTC ATTAGCAACT GAAGTCCGAG CTGCTTCTTT CACCGACATA GAAGATCTCT TGGCGTTCGT TAGCTGGCTA GATGAAGAGC TCTCCTTCTT GGTTGATGAA AGGGCAGTTC TTAAACACTT TGATTGGCCA GAAGGTAAAG CTGATGCGCT ACGAGAAGCA GCTTTTGAAT ATCAAGATCT TATGAAACTG GAGAAGCAAG TTACTTCCTT TGTCGATGAT CCTAATCTCC CTTGTGAACC TGCTTTGAAG AAGATGTACA AGTTGCTAGA GAAGGTTGAA CAAAGTGTAT ACGCGCTTTT ACGTACAAGA GACATGGCGA TTTCACGATA TAAAGAATTC GGGATTCCAG TTGATTGGTT ATCTGATACT GGCGTCGTAG GGAAGATCAA GCTTTCGTCA GTCCAGCTCG CGAAGAAGTA CATGAAACGA GTAGCTTATG AGCTTGATTC AGTGAGTGGC TCTGATAAAG ATCCTAACAG AGAGTTCTTG CTTCTCCAAG GTGTTCGTTT CGCGTTTAGA GTCCATCAGT TTGCTGGAGG GTTTGATGCA GAGAGCATGA AAGCATTTGA AGAACTAAGA AGCAGAGCCA AAACTGAAAG TGGAGGAGAC AAGAATAATA ATAATAACAA CAATGAAGAA GAATCTGTAA ACTGAGTTTT ATTACTTTTC TATGTATCAT TTGTATCACA TACATGATTT ATAGTACAGT GAAATTTATA GATTCTTGTA AAAAGAAATA C |
| Length | 3311 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 2246949.. 2250943 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G25690.1 |
| Description | Hydroxyproline-rich glycoprotein family protein |
| TAIR curator summary | actin binding protein required for normal chloroplast positioning |
| Alias | [AtCHUP1][CHUP1][Arabidopsis thaliana CHLOROPLAST UNUSUAL POSITIONING 1][CHLOROPLAST UNUSUAL POSITIONING 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg492157 | Aldolase superfamily protein |
| 6.9282 |
Ahg478862 | Aldolase-type TIM barrel family protein |
| 7.34847 |
Ahg487193 | glutamate synthase 1 |
| 9.16515 |
Ahg474875 | |
| 9.48683 |
Ahg491390 | glycine decarboxylase P-protein 1 |
| 11.3578 |
Ahg493531 | HXXXD-type acyl-transferase family protein |
| 11.4891 |
Ahg949484 | ferric reduction oxidase 6 |
| 12.4097 |
Ahg922817 | plastid movement impaired1 |
| 13.0384 |
Ahg482018 | FtsH extracellular protease family |
| 13.1909 |
Ahg323421 | Phox (PX) domain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|