Detail



ID : Ahg487303

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487303|fgenesh2_kg.6__437__AT5G05140.1
Sequence
TTTTCTCGGG AAAATCCTTT GTGGGCTTTC CGGGAAAGTT TTTTGTCAGA TTCGGAAACA GATTAAAAGA ATAGAAATCC ATAAGAACTA CCAAACAGAT TTTGTGTTTA TCTTTATAGA TTCTTTTGAT CTCGTTTGAT CATCTTCAAA GTATCAACCT TTAAGATTTT GATCCTTTTA TGATTGAAAC AAATCTTCTG TCTGATCTTC TCTTTTCAAC GATCCCAATC TTCTTCTTCT TCTTCCTTTT CTGGGAAAAT TTTGGCTCCT TCTGAATTTT TGTGGGAAAA TTGAATTGAA TCCGATTAGG AATCGGATTC GAATTTTGAC GATGAAAGCA TCAGGTTCGT TAGATAGCTG GAGAGAATAT TTCCGGCGAG GAGATTCCGA TATTTTCGGG ATCATCGATC ATGCGATCAT GGTGGCTGCT ACTGATTGTC CTAACAAATT CAAATCCAGA AGAGACAAAA TCGCCGAGCT TTTATTCTCC TGCAGAGTGA GCCGCTGCAT CGGATGCGAC CATCTCGAAT TGTCTGTTCC CGGAGACGAC GAGGGTAATC GCGGCCGTGG AGCCACCGGT GACGGCGGTG GTGGTACGGC GGTTGATGAA GATTATGAGG TTGGTGGTAG TAAAGAGAGC AAAGCTAATA GTAGCAGAGG AGATAGTAAT CAGATTGTTA GCAATTATAC ATTTGATGAA GCTGAGGCTT TGAGTGATGA GATTGAAGAG TTTTCTGTGG TTTCTAAGGA GGTTGCTAGG ATCAAAGAGA TCTTGCTCAA CAAAGAAGAT GAGCCAAACT CGGTGTTACT CGATTCTTTA AGACATCTTA AGTTGATGTC TTTGAATGTG GATATTCTTA AGAGTACTGA GATTGGAAAG GCTGTTAATG GCCTGAGGAA ACATGGTTCT GATAAGATTC GACAACTCGC AAAGACTCTT ATCGCAGAGT GGAAGGAGTT GGTGGACCAA TGGGTGAATA CCACAAAGGA AATTACTGGT GCTGAAGGTA CACCAGAGTC TGCAAACCCG TCTGTCGTTG ATGAAGAAGA GGCGTTTCCA TCGCTTCCAT ATGATGTTGA CATCTTTACA CCGGAACCAA ACGGATTTGA AATCTCACAC TTCTTTGATT CCTTGGACTT TGATGGAAAT CCTCGTAATT CTAAAGAATA CAACACAAGC CGAGAGCACG AAAGAAGACC ACAAAATATC GCCAAGAGAA GACCAGAGGG AACACAAATG AGGATACAAG ATGCTCCTTT TAGATCTATT AAGCCATCAT CAGATGCTGA TTTTGATGGC ACTAGAAGAC CTCTAAAGCA AAATACAGAG CAAAGGATGA AGAACGAAAC GGTATCAGTT CTCAAGTCTG AAAAACCCAT GATCCAAAGG AAACCGGTTG TTACAGAACA GAAGCGGAAA GCTCCCGGAC CTCAACAAGA AAAACTTAAA GGTCTTGATG CAGACGCAAA GTTTGAGTTT GCAAAGAGGA AACTTCAAGA GAGCTACCAG CATCATGAGA ATGCCAAGAA GCAGCGGACG ATACAAGTAC TTGAGATGAT CCCAAAGCAA GGTAGTGCTC AGAAACCGCA ACTCAAGAGA CCTGGAATGA GCAACAGGAA TTGGGCTAAC GGGCGAAAAT AGCTTCTTCT CTGTCAAAAT GGTGAATAAC TCTCGGCAAA AGTCATTTTA CTCCATACTT ACCACACATA TCTCGCAATC TCTGGTGCAA TAAAAGGTAA ACAGAGTCTA GTTCCACAAG CTGGATACAG TAACAAGCAG AGGAGAAGGA ACAGAATCCA ACATAACTTT ACTTTGAACA AACTGTTTTC TCCTCTGTTT TGTTCAGTCT TGGATTCACC AATTGCAGCA AGATAGGGAT CCCAATTATT GTTTCTTTTA TGTGTTCTTA CTACATTCTT GAGACTTTCG GTACAGTGTC GGTTTAGTCG GGTTATGTTC GGTTTTGGGA CAAGGAGAGA GGTCCCTTT 
Length1989
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1789778.. 1792531
Download Sequence
A.thaliana
AGI-codeAT5G05140.1
DescriptionTranscription elongation factor (TFIIS) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg471947 lipoxygenase 3
12.0416 Ahg927234 transferases, transferring glycosyl groups
18.9737 Ahg935792 receptor-like kinase in in flowers 3
21.2603 Ahg471506 Protein of unknown function (DUF1262)
23.7487 Ahg926495 multidrug resistance-associated protein 3
28.1425 Ahg929255 Nodulin MtN3 family protein
30 Ahg483808 ABA-inducible BHLH-type transcription factor
37.3363 Ahg950964 heat shock transcription factor B2A
37.6298 Ahg933857 protein kinase family protein
38.8844 Ahg493153 SCARECROW-like 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression