Detail



ID : Ahg926900

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926900|scaffold_202461.1
Sequence
TCAAGTTCCA ATCCTCCGTT ATGTCAACGA CTTCCTCCGT GCGTGCTCGA CTAGCTTTCG TTGCTTTACT CTCAGCGACG ACTTTTTACT GTATCCATAA ATACCGCCGC TTGAAACGTC TGAAAAACCT CTCGTTAAAC CCTAGCTCTA CCTCGAAAGC CAGCAGAGGA AAGATCTTCT TCATCTCCCA AACTGGTACA GCTAAAGCCT TAGCTCAACG GCTTTACGAG CTATGCGCAT CTAACGACAT AGCATTTGAT CTCGTCGATC CACGGAGCTA CGAACCTGAA GATCTCCCTA AAGAAACCCT AGTTTTATTC ATCGCGTCGA CTTGGGATGG CGGGAAACCG CCTAAGAACG GAGAGTTTCT TGTGAACTGG CTTGGTGAGA GCGCTGAGGA TTTCCGAGTC GGCTCGCTTC TTCTCTCCGA TTGCAAATTC GCTGTTTTCG GTGTCGGCAG CCGTGCGTAT GGTGAATCGT ATAATGCTGT GGCGAAGGAA TTGTCGAGTA GGATGATAGG ATTGGGTGGA CTCGAGATGA TTCCGGTGGG AGAAGGCGAT GTTGATGACG GAGAATTAGA CAGAGCATTT CAAGATTGGT GTACTGGAGT TATTAGGGTT CTGAAAGGAG GTTCTGCTCA AGAAACAAAT GGGGTTTCGC AGCAGATTGG TGCTGTTGAG AATGATCTTG AGTACTACGA TTCAACGGAT GATGAAGATG AAGAAAATGA TGCAGATGGA GGTATTGTTG ATCTTGAAGA TATTGCTGGA AAAGCTCCTT CGAAGAGAAA TGGCGTAGTT AAAGTGACTA AAGTTGATGG AAAGAAGGAA ATGGTAACCC CTGTGATTAG AGCAAGCTTA ACGAAGCAGG GCTATAAAAT AATTGGTTCG CATAGTGGGG TTAAAATATG TAGATGGACA AAGTCACAAC TTAGAGGCAG GGGTGGTTGC TACAAGCACT CCTTTTATGG CATTGAGAGT CACAGGTGCA TGGAGACAAC ACCTAGTTTG GCCTGTGCAA ACAAATGTGT CTTTTGTTGG AGGCATCACA CCAATCCTGT GGGAAAGAGC TGGCAGTGGA AGATGGATGA GCCGTCTGTG ATTGTGAAAG GTGCTCTTGA TCTTCATACA AAGATGATTA AGCAAATGAA AGGAGTTCCA GGTGTAACTC CAGAGAAATT ACAAGAAGGT CTAAACCCAA GACATTGTGC GTTGTCACTT GTTGGTGAGC CGATTATGTA TCCGGAGATC AATGCCCTTG TAGATGAGCT ACATGGAAGG CGTATCTCTA CATTTTTGGT TACTAATGCA CAATTCCCTG AAAAGATTTT GATGATGAAG CCTATCACCC AGTTGTACGT AAGTGTAGAT GCTGCCACCA AAGAGAGCTT GAAGGCCATT GATAGACCTC TCTTTGCTGA CTTTTGGGAG CGGTTTATTG ACTCCTTGAA AGCTCTCCAA GAGAAGCAGC AGCGAACCGT CTACCGTTTA ACACTTGTCA AAGGATGGAA TACAGAGGAG CTAGATGCTT ATTTCAACCT CTTCAGCATT GGGAAACCTG ATTTCATCGA GATCAAAGGC GTCACATACT GCGGATCCTC TGCAACATCA AAGTTGACAA TGGAGAATGT ACCTTGGCAC GCAGATGTTA AAGCATTCTC AGAGGCTCTG TCTCTGAAGA GCAATGGGGA GTACGAGGTT GCTTGCGAGC ACGCCCATTC TTGTTGTGTT CTTCTAGGGA GAACCGAAAA GTTCAAAGTG GATGGAAAGT GGTTCACTTG GATTGACTAT GAAAAGTTCC ACGATCTGGT GGCTTCTGGA GAACCTTTCA CGAGCACAGA CTATATGGCT CAGACACCAT CGTGGGCGGT TTATGGAGCA CAGGAAGGTG GGTTTGATCC AGAGCAGTTG CGTTACAAGA AGGAAAGGCA TCATCATCCT AAACCACAAG CGGTTCTAGC TTAAAGCTGT TTTGCTAGCC TTTAAAGCTT CTT 
Length1993
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15622660.. 15625512
Download Sequence
A.thaliana
AGI-codeAT1G75200.1
Descriptionflavodoxin family protein / radical SAM domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg470695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
8.48528 Ahg315447 ILITYHIA
8.48528 Ahg496396 DEAD box RNA helicase (PRH75)
9.48683 Ahg495739 TCP-1/cpn60 chaperonin family protein
9.64365 Ahg353700 DNA topoisomerase, type IA, core
10.3923 Ahg354097
10.583 Ahg486447 LETM1-like protein
10.7238 Ahg322676 nonsense-mediated mRNA decay NMD3 family protein
12.0416 Ahg489475 TCP-1/cpn60 chaperonin family protein
14.8324 Ahg482032 elongation factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression