Detail



ID : Ahg927161

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927161|scaffold_202722.1
Sequence
CAAAGAAGCG GTACACCGGA ATGGAGAAAA CTCCGACGCA GATTGTTTCC GAACTGGGTT CTCGTTTGCT TCAATTATCT CGTCCCAACA AGGATTCTCT GGTCAAGTTA CTACGGGAAG TTGCTAATAC GCTGTCACAA ATCGACCAGC CTTCAGCCAC AAACAAGGAA AAAGGTCTGA AACTGTTAGA AGCTGAGTTA AGACCTCTGA AGAAATCCAT TATCAAGCAT GGTCTTCTTA AGAATCGTGA TAACGACGTG AGTCTCTTGG TCACTGTTTG TGTCTCCGAG CTTTTCCGGA TTTTAGCACC TAATCGACCT TTTGAAGACA AATATCTCAG GGATATCTTC ACTCTCTTTC TTGCTGAGTT TTCTGAGCTA TCTGATACTG TAAGCCCTTA TTTCTCTAAG AGGGCGAAAA TCTTGGAGAC TGTCTCTCGA TTGAAATGTT GTCTGCTAAT GCTGGACGAG GACTGCCTAG ATTTAGCTCA CGAGATGTTC AACATGTTTT TCTCTCTTGT TAGAGAGCAC CATCAACAAA GTTTAATTAA CCAGAAAAAT ATTAAAACGC AGCAGCGAAA GGCTAACACG CAGCAAACAC AACAAAGTTT ATTTAACAAC ATCTTGAATA TAATGACTGA TATTCTGGAG GAAGAGGCAA ATTCGTCTTT TGTCGTTGCT ATTCTGGAAA ATCTTGTGAA GGAGGGAGAG GATACAACTT CTGCTCCTTC TAAGCTCGCC AGTTCTCTCA TTCAAAGCTG TACCGACAGG CTGGAGCCGT TAATTTGCAG CTTTTTAACA TCATGCTTTA TGGAGAAAGA TTCCATCCAG ACCAATCTCA AAGATTCTTA TCACGAAATC ATATTTAAGA TCTCCTTAAA TGCTCCCCAG ATGCTGCTAG CAGTAATCCC CAAGTTGACC CAGGAACTAC TGACTGATCA GGTCGATGTG CGAATAAAAG CCCTTAACTT AGCTGGAAGG ATTTTTGCGC AGCCTAAGCA CTGTTTAAGT TCTTACGGAG AGACATATCA AGATCTTTAT GCAGAGTTCT TGAGAAGATT CTCAGATAAA TCTGCAGAAG TCAGAATGGC TGCACTGAAA TGTGGCAAAC AGTGTTACTT TGCGAATCCG TCTGGAAATA AAGCATCTGG AGTTCTCACT GCTATCCAAG AACGCCTATT AGATTTTGAT GATAGGGTTC GAACACAGGC TCTGGTTGTT GCTTGTGATA TTATGAAGTT TGATATGAAG TATGTTCCTT TGAATCTGAT TTCTGAAGCC AGTGAGAGGC TTCGGGATAA GAAGATATCT GTTAGGAAGA AGGCTCTGCA GAAGCTGACA GAAGTATATC AAGATTATTG TGACAAGTGT TCAGAAGGAG ACATGACAAT AAATGATCAT TTTGAGCAAA TCCCATGCAA AATCTTGCTA CTTTGCTGCG ATAAAAATTG TGATGAATTC AGGTCTCAAA ATTTGGAACT TGTGCTTTCC GATGATCTTT TTCCTCGCCT TCTTCCAGTT GAGGAGAGGA TGCGGCACTG GGTCCAATGC TTTGCCATTA TGAATCATAT CCACATTAAG TCACTCAATT CAATTTTATC TCAGAAAAGA AGGTTGCAAA ATGAATTGCG GCAATGCCTA ACCCTCTGGA GGAAAGCTAA GGATGACAAT ATAGAGGAAG TTCAAAGAAA GAAAAAGAGC TACTTTGTAA AGCTTTCAGC TTGCTTTCCA GATGCTTCCG AGGCAGAAGA TTTCTTTCAA AAACTAGACC AAATGAGGGA TGCATCAATT TATGATGTCT TAACTTTACT GCTGGATGAA CTGTCATCCA CAAAGGCTCA AATTATTAAA GAGAAGTTTC TCAACATGTT TGGTGCTAAA CATTCTCTTT TCGAGTTCCT GCGCATACTT TCTACAAAAT GTTCGCCTAA TATATTTAGC TCAGAGCATG TTCAGTGTCT TTTGAATCAG CTTTGTGGCA GCACCTCTGT TAACACGCAA TTGAAGGCTC CTTCCATCAA ACTTCTTCTG GTTATTCTCA ACATCTTCCC TTCTTACCTG AGAGGTTCAG AAAAGCAGTT TCTGAAGCTG CTAGAGGAGA ATTATTCAGC TGCTGACGAG CTAACTGTAG TTTTATCAAA GGCAGCTCCT TATATTTCTG TCAACTTCGG TGACTATTAC CCTGTTCTGG AGAAGGTGTG TCTGGAGGGT ACTCGTTCTC AGGCAAAATG TGCGGTTTCT GCCATCGGTT CATTGGCTGG ATCATCTGAC AAATCTGTAT TTTCCGAGTT ATGCGAGATG CTCATGGATT CTTTGCTGGG TGGACGGAAC ATTCCAACAA CTTTGCAGTC TTTGGCGTGT GTTGGGCAAT ATTCTGTTTT GGCATATGAC AATATATATG AAGATATCAC CAGCTACATA TACCAGGTTT TTCAAATATA TGGGCTCAAA ACACTTGTGA AAAGTTTCTT GCCTCGTCAT GGTCAAGTCG TAAGGAAAAT CGAGGACTTG CTAAACATTT TGAAGAAAAC ACTAAAATCA CAAGGACACG ATGGCATCAA ATCATGGTGC TTATTTGCTC TTGAAATTTG TAGCGAGGAC ACAGGGGCTA ATGTTAGACT GGCTGCTGCT AAAGCTGTTC TATTGCTTTC AAGGAAATGG GACCTTCATA TTTCTCCTGA AATTTTCGGT CTAACCATTT TGATGGCAAA GTCATTAAGA TACATCAATG GATTCATCAA CAATGCTACA AGAGAATCTC GGACATGTCG GGATTTAGAT CAAGGAGAAT CACTCACTGA TAGTCCAGCT TATATGATAG TGTTCCTAAT TCATGTTCTT GCACATGACC CAGAGTTCCC TTCAGAAGAC TGCAGGGACG AGCATGTCTA TGCTCGCTTT TGTGGCCCTC TGTTCTCGGT CTTACAGGTG TTTCTTAGTA TCAACAATAA TGGTTTTACT ATCAAGGAAA CCGCCCCTTT CTTGTTCTGT ATCTTCCGTG CAATTAAAAG AGCTGAGGAT GCTGTTGATT CTCGTAAAAC GCCAAATAAG GCTAAGTCTC GTACCCAAAA TGCTTTGGAA CAAAGTTTCA TTGAAAGAGT AGTTCATATA TTCCAATCAC AGATCTCCAC GCATGATCAG AGGTGTCATA AAGATAGCCT AGCAGTTGGT TCGCAAGACA AAGTTTTACC TCCATTATCG GGCAATCAAA TCGAAACGTC AATTACTGGT TCAACCGAAG CCAGCAAAAA CAACACGAGG TGTAGCAGGA AGCGAACTCA TCTGGGAGAA CATATTTCTT GTAACTCCTT ATCTTTGAGA ACAGTTGAGT CGGAAATTCC TATAAAGAAG CTAGAAAGAC ACAATACTTG TTCAAAGGAG AGTGTCGAAG CAAGTGTAAG CAATAAAATT ACATCTTCCA AACACTCCGG GGTAGTATCT GCTTTAAAGG ATATCAGCAA CCATGGTGAA GCAATCATTG GGAAGCGGAT TAAATTACTC TCTCCCACAG ATGGATGTTT CTATCCGGGC ACTGTTGAGA AGTTTAATTC TAAAAGCAAC TCTCACAAGA TTATTTTCGA CAATGGTGAT GTTGAATTGG TTTGCTTGGG TAGCGAGAGC TGGGAGACCC TGAGCCATGA ATTCATGGGG CAACAGGAAA TATTGGGAAA GGAGACGGAA TCTTTTGGTT CTCGGAACTG CGTCCCTGAA ATCAGTCATA CACTTGCAAA GGCTGATGCC CAAAAGCAGA AAACTAGAAC AAAGCAGCAG AACAAAAAGT TGCCTGCCAA ATTGAATCCT CCAGCTGCAA AGTCAAAAAA GGGAAATTCA GTTTGTGGAG AAGGATCAGT TTCAGAAGTG ACCGACACAA GTGACAATAT TGGACTCAGA AGAAGTCGGA GACAGAGAAC TTCTTAAGAC CTCTTTAACG ACGGAGGTCC T 
Length3941
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16702303.. 16712152
Download Sequence
A.thaliana
AGI-codeAT1G77600.3
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.9282 Ahg918994 Transcription factor TFIIE, alpha subunit
21.0713 Ahg478095 CONSTANS-like 9
30.5941 Ahg475328 aminophospholipid ATPase 3
34.641 Ahg474975 ubiquitin-conjugating enzyme 5
34.7275 Ahg496205 RING/U-box superfamily protein
40.1497 Ahg477983 binding
42.0714 Ahg489585 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
46.6905 Ahg485341 ARM repeat superfamily protein
46.9894 Ahg935078 zinc finger (ubiquitin-hydrolase) domain-containing protein
47.5605 Ahg473066 syntaxin of plants 61
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression