Detail



ID : Ahg935078

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935078|scaffold_403066.1
Sequence
GCTCTTTCCC GCTTCTGGCG ATGTTCATCC TCAGAGTTCA TTCCGTTGAC TCCGAGCGAC CAATCTCCAT TGAAGAAGAT GAATCAGGTT TCACCTACGC ATCAAAGAGA ACTCAGCCTC CTCTTAAACT CATACAACCA TCTCTCAAAC TCACCGAACG CAAAGGCTTG ATCCATCTCT ACCGCAACTC TTCACATAGC TCGCTACCTA ACCCTAGCTC CCGATCCACC ACTCTCTTCA TCGTCGCTGT TCCCAATTAC ATGTCCTCTC TCGATTTTAT CCGTTTCTGT GATTCCCGCA TCTCCCAAGT CTCCGATATC CTCTTCATCA GGAACGATGG AATGGAAGAT CGATATAGTG TTCTTATCAC ACTTAGTGAT CAATCCGAAG CAGATGGTTT CTACAATTAC CTGAATGGGA AAACATTTTC ACCATCTGAG GCTGAGGTTT GTCATATTCT CTATGTAATG TCGGTGGATC ACACGGAATT TGATGTGGTT GCTGCAGAAG CACCTGCTGG ATTTACCGAG TTACCTACTT GTCCAATATG TCTTGAGAGA TTAGATCCTG ACACCAGTGG TATAGTTAGC ACTCTTTGTG ATCACTCCTT TCAGTGTTCT TGCACTTCAA AATGGACTTA TCTGTCCTGT CAAGTTTGTC GATTGTGTCA ACAACAAGAT GAGATATTAA GCTGTTCTGT TTGTGGAAAA ACAGAGAATG TATGGGCATG TCTTGTCTGT GGCTTCTTAG GTTGTGGAAG ATACAAGGAA GGGCATTCTA TCAGGCACTG GAAAGAAACG CATCACTGCT ATTCTTTTGA TTTGCGAACA CAACAAATCT GGGATTATGT TGGTGACAGC TATGTTCATC GGTTAAATCA TTCAAAAATT GATGGAAAGT CAGTAGAGAT GAACACCCGT TGTCTGTCAC ACGAAGGGGA CTGTGGTCTC TGTGAGTGTA GTGAGGATAC AGGAATTAGC GGAGCCATCT TTAACAGCAA AGTTGATTCA ATTGTAATCG AGTATAATGA CCTCCTTGCA AGTCAACTTA AGGGACAGCG ACAGTACTAT GAATCTCTCA TTGTTGAGGC GAGAAGCAAG CAGGAAAGTA GTATTGCCGA AGCAGTTGAG CAAATTGTTG TTAACAAAAT GCAGGAGCTT CAGAATGAGA TTGAAAAATG TGAAGAGGAA AAAAGTGGTA TTACTGAGGT GAATAGAAAA CTTATAAAAG AGCAGGAAAC TTGGCGGAAG AAGGCCAAAG AAATAGAAGA GAGGGAAGCT GCATTGCTAG GATCAAAAGA CGAGATGCTA GCTGATCTTC AAGAACAGAT AAGAGATATT ACGGTCTTCA TTGAAGCCAA GAAAACCTTA AAGAAGATGT CATCAGATTC GGATGGTATA CGCGAAGGAA CCGTCTTACC AGTGCCTATC AACGCCGAGC CAGTTTCCTC AGTTAGAAGG CAGAAGAAGC CAAACCGGAG AAAGTAAAGA GCAGATTTGT GATGCTT 
Length1507
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT2G42160.1
Descriptionzinc finger (ubiquitin-hydrolase) domain-containing protein
TAIR curator summary
Alias[BRIZ1][BRAP2 RING ZnF UBP domain-containing protein 1]
Gene coexpression
MR
MR Locus Description
9.16515 Ahg493280
12.6491 Ahg893068 embryonic flower 1 (EMF1)
18.412 Ahg478172 ubiquitin-conjugating enzyme 11
18.7083 Ahg950254 calcineurin B-like protein 2
26.7208 Ahg332819 Arabinanase/levansucrase/invertase
40.1746 Ahg319769 MAP kinase 7
41.6653 Ahg473664
46.9894 Ahg927161 ARM repeat superfamily protein
47.3709 Ahg923664 syntaxin of plants 81
47.6445 Ahg477131 syntaxin of plants 52
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression