| Annotation |
|---|
| Description | jgi|Araly1|927433|scaffold_202994.1 |
| Sequence |
TTTGTTTCTG TTTCCGTCAA TCATGACGTC TCTTTCTATT CAACCATTTC CAGAGATTTC AAGGATGGCT AGAAATTTGG ACTCGCGAAA GAAAAGAAGG ATCTCTTTGG ATGGAATTGT TGCCTTATGT GAGCATTCCA AAGAGATCAT TGATTCATTG CCTATGTTGA ATTCACCTGA CTACTTCTTG AAGCCATGTA TGAATGAGCT GGTTGAGCGA GAAATTGAAA ATCCTGATTA TTGCAGCCGG GTTCCTGATT TCACTATTGG CAGGATTGGT TACGGTTATA TCAAGTTTCT TGGAAACACA GATGTAACAA GGTTGGACTT GGATCAGATA GTTAAGTTTC GTAGGCACGA GGTAATTGTT TATGATGATG AGACCTCCAA GCCAGTTGTT GGTGAGGGAC TTAACAAGGT TGCTGAGGTG ACTCTGATTG TAAACATACC AAATCTAACT TGGGGAAAAG AGCGAGTTGA CCATATTGCT TACAAATTAA AACAGAGCAC GGAAAGACAA GGGGCAACTT TCATCTCATT TGATCCCGAT AATGGTTTAT GGAAGTTCTT GGTTCCACAT TTCAGCAGAT TTGGATTGAG TGATGATGAG GCAGATGATA TTGCTATGGA TGATGCGCCA GGTTTGGGAG ATCCTGTAGG ACTGGATGGT AACAAGGTAG CTGACATTGA TGAAGAAGAT CAAATGGAAA CTTCTGAGCT AGAGCTTTCT CACTCTCTTC CAGCTCATCT AGGACTTGAT CCTGGAAAGA TGAAAGAAAT GAGAATGCTG ATGTTTCCTA ATGAAGATGT AGACGAGAGT GAGGACTTTA GAGAGCAAAC TTCCCATAAT ATGACATCCT TGACTAAACG AAATGTAAGA CCTTCACAGA AAATTTCTCA AAGAAATAGT CATCAAGACC CTCCACCTGT CGTGCGGAAA ACTCCGCTTG CGTTGCTGGA GTATAACCCT GGTAATGATA AAAGCTCCCC AGGCAGTATC CTGATGGTGC AACAAAATAA GAATCTGGCA GTGAGAAAGT CGAAAACGGG AGGTTTCGAG CTGGACATCA GCCATGTCAC GCCATTAACT GATAACTATT CCCGCAATGT TGTTGATGCA GCATTATTCA TGGGAAGGTC GTTCCGAGCA GGTTGGGGCC CAAATGGCAT CCTTTTTCAC ACTGGTAAGC CAATATGTAG CTCCAGTTCC CAGATGGTAT TGTCTTCTGT GATCAATAAA GAAAAGATAG CAATTGACAA AGTGGTTTGG GATAGAAAGG GAAAAGTTCG GAAAGAACTT ATTGATTCTG CGTTTGAGGC TCCCTTAAGT CTCCACAAGG AATTGGATCA TGTAGAAGAA GATGTTAGGT TTGGCTCTTT CAGACTTAAA CTTCAGAATG TTGTCACTGA TCGTGTAGCT CTTTCAGATA TCTGCCGAAA TTATATTGGT ATAATCGAGA AACAGCTGGA AGTTGCTGGG TTGTCCACAT CTGCGAAGCT GTTTTTGATG CACCAAGTCA TGGTGTGGGA ACTCATAAAA GTTCTCTTCT CTGAGAGACA GAGTACTGAA CGTTTGAATC ATGCAGCTTC TGATAATGAG GAAGAGATGA TGCAGGATGT GAAGGAAGAT TCTGCAGAAA TTGATACAGA AGCTCTTCCA CTTATCCGAA GAGCAGAATT CAGTTGTTGG CTCCAAGAAA GTGTCAGTCA CCGTGTACAA GAAGATGTGA GTGATCTAAA TGGTTCTGGC TACCTTGAGC ACTTATTCTT TCTTCTAACT GGACGAGAGC TTGATTCAGC TGTGGAACTT GCCATATCTA AGGGAGATGT TAGACTTGCT TGTTTGTTGA GCCAGGCTGG TGGATCAACT GTAAACCGCA ATGATATCTT GCAGCAGCTT CACCTTTGGA GAAGGAATGG GCTGGATTTT AATTACATCG AGAAGGAGAG AATTAAGCTC TATGAATTGC TTGCTGGGAA TATCCATGAT GCGTTACAAG ATTTTACAAT TGACTGGAAG AGATTCCTAG GGTTGTTAAT GTGGCATCAT CTGCCTCCCG ACAGTTCATT ACCTGTCATC TTCAGAAGCT ATCAGCTCCT GCTAGATCAG GCAAAAGCTC CGTGGCCCGT CCCAATATAT ATTGACGAAG GACCTGCAGA TGTGTTTGTA AGCAACAAGC ATTCTGACCT CTTGTATTAT CTTATGCTTC TGCACAGCAA AGAAGAGGAA GAAATTGGTT TCCTGAAGAC TATGTTCAGT GCCTTCTCTT CAACTGATGA TCCACTTGAC TATCATATGA TCTGGCACCA CCGAGGAATT CTGGAAGCAG TTGGAGCTTT CACTTCAGAT GATCTTCACA CTCTCGATAT GGGATTTGTT GCACAGCTTC TCTCTCAGGG CCTTTGTCAT TGGGCTATCT ACGTTGTTCT TCACATACCC TTCCGTGAAG ATCATCCATA TCTACACGTC ATTGTCATTC GGGAAATCCT GTTTAAATTC TGTGAAACTT GGAGCTCTGT GGAATCACAA CGGCAATTTA TCAAGGACTT GGGTATCCCT TCTGAATGGA TGCACGAAGC TCTGGCAGTT TATTACAATT ACCATGGAGA TTTCGTAAAG GCTCTTGACC ACTTTATTGA ATGCGCAAAC TGGCAAAAAG CTCATTCCAT TTTTATTACG TCAGTTGCTC ATTCATTGTT TTTGTCAGCT AACCATTCAG AAATATGGAG AATCGCTACT TCAATGGATG ATCGCAAGTC TGAGATTGAA AACTGGGATT TGGGTGCTGG GATTTACATG TCATTCTATT TACTAAAGAG TTCACTGCAA GAAGATGCTG ATACGATGGT AGAACTGGAA CCCCTTGATA GCACAAACGA GTCGTGCAGA AGTTTTGTCG GTCGTTTAAA CGAATCATTG GCTGTTTGGG GTGACAGATT ACCAGTTGAA GCTAGAGTCG CATACTCAAA GATGGCAGAG GAAATATGCG ATTTGCTTCT GTCAGATCTG AGTTTGGATC CAAGCCGAGA GACTCAGCTA AAATGTTTTG AGACGGCCTT TGATGCCCCT TTGCCAGAAG ATGTAAGATC AACACATCTG CAAGATGCTG TGTCACTCTT CTCTCTATAT CTCTCAGAGA CAAGCCAAAT CTCAGCTTAG TGAAACAGAC ACTATTTTTC |
| Length | 3180 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17849792.. 17854010 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G80680.1 |
| Description | SUPPRESSOR OF AUXIN RESISTANCE 3 |
| TAIR curator summary | Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens. |
| Alias | [MOS3][NUP96][PRE][SAR3][MODIFIER OF SNC1,3][PRECOCIOUS][SUPPRESSOR OF AUXIN RESISTANCE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg319762 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
| 3.4641 |
Ahg937965 | FG-GAP repeat-containing protein |
| 4 |
Ahg477212 | tetratricopeptide repeat (TPR)-containing protein |
| 4.3589 |
Ahg476609 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
| 4.47214 |
Ahg943269 | thioredoxin family protein |
| 5.47723 |
Ahg491315 | dynamin-related protein 3A |
| 9.16515 |
Ahg934754 | ubiquitin-protein ligases |
| 9.79796 |
Ahg487366 | sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors |
| 10.7703 |
Ahg475037 | GPI transamidase subunit PIG-U |
| 14.0712 |
Ahg471898 | KU70 homolog |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|