Detail



ID : Ahg928820

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928820|scaffold_301277.1
Sequence
TCGCTGCTAT CTCTCTGTCT CATGGCGAAT CCGACGGAGA ATCTCGACGC GAATCTACCA ATCCGAGAAC CAGAAGCTGA AAAAGAAGTT GAAGAACTTA ACGGAGACGA AGAAGAGGAG GATTACGAAG GAGAAGACGA TGACACCGAG TCGAAATCTC AAACGCGCGA AGGCGGATCC GACAGAATCA AGGCGGAATC GCTATTCCGT CGGATGCGAG CTGCTCCTGT GCCGGTTCGT GTTCACGACG TGATTGTCAG TGGGAACGAG AAGACTAAGG ACCATATCAT TGAGGCAGAA GTGGATGCTG TGAGAGAGGC GACCACGTTG CAGGAGCTTC TCGAAGCTTC TAGGGTTGCC TATTCGAATC TCCGAGCGTT AGATATCTTT GATTCCGTCA ACATTACGCT CGATTCTGGT CCTCCTGAGC TTCATGGTAC CACCAATGTG GTAATCGAAG TTGTCGAGAG CAAAAGCCCT CTCACTGGCC AAATCGGCGC CTACACTAGA GCAGAGGCTA GATCATCGAG CGTTGAAGCA TCTTCGAAGT ATAAGAACAT TTTTGGTTAT GGAGATATTT GGGACGGGTC TATAGTTTAT GGATGTGACA ACTCTGCTGA GGTTGGCTTG GGGATGTATT TACCAAGGTT CAGAGGACTT TCTACTCCTT TTACTTCCCG TCTTTTCCTT TCGACTCAAG ACTGGCTTAA GTTTTCATCG TATAAAGAAC GATCCCTCGG TCTTTCTCTC GGTCTTCTCT CAAGCAAGTA TCACGAGCTG GTCTACACGA TTGCTTGGCG TAATCTGATA GATCCATCAC AAGCCGCTTC AAAATCAATA AGGAGGCAAC TGGGACACAG TCTGCTTTCT GCATTGAAGT ATACTTTTAA ATTTGATCAG AGAAACTCAA ACTTGAGGCC AACTAATGGA TATGCTTTCA TCTCTACTTC TCAAATTGGT GGTCTTGCTC CTGATAGCCG AAGCCTACGC TTCTTGAAGC AGGAAATTGA TCTTCGATAT GCTGTTCCGT TTGGATTTTA CAATGCTGCT CTAAACTTTG GCGTGTCTGG GGGTGTCACC TTTCCGTGGG GAAGCGGATA CCAGAACCGC CCTTCCTCTG TACCAGAGAG ATTCTTCTTG GGTGGCAATT CATCGCCTGT ATGCTCTTTG GGTGGACCAT CCGCACTATG GGGATTCAAG ACCAGAGGAC TTGGTCCCAA CGAGCCAAAG AGGAAAGGTG ATAGTGAACG GGATTTTGTT GGAGGAGATG CTGCGGTGAC TGCATTTGCG GATCTCTCAT TTGATTTGCC AGTGAGATGG TTAAGAGAGA GAGGAATCCA CGGGCATGTG TTTGCTTGTG CGGGGAATAT GGCAAAGTTA TCAGAGAATG AGTTTAGAAA CTTCACTGCT CCAAAGTTCT TGGAGACATT CAGAACTTCA GTTGGTGCTG GAATCGTCTT ACCAACTAGT CTATTCCGTA TGGAGCTTAA CTACTGCCAC ATATTGAAGA AACAAGAACA CGATCAAGCG AGATCAGGGG TTTTCGTGAC ATTCTCTGCC TCGTCCTGAG AAACTTTAGC TGAAGAAGG 
Length1589
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4186130.. 4188164
Download Sequence
A.thaliana
AGI-codeAT3G11070.1
DescriptionOuter membrane OMP85 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.65685 Ahg485468 Protein of unknown function (DUF3353)
20.4939 Ahg488073 dgd1 suppressor 1
23.6432 Ahg488271 Pentatricopeptide repeat (PPR-like) superfamily protein
26.533 Ahg475254 Clathrin adaptor complexes medium subunit family protein
26.7208 Ahg941736 P-loop containing nucleoside triphosphate hydrolases superfamily protein
27.9106 Ahg479498 Protein of unknown function (DUF177)
29.1033 Ahg952212 ribosomal protein L23AA
32.249 Ahg485272 Tetratricopeptide repeat (TPR)-like superfamily protein
36.9459 Ahg946627 pentatricopeptide (PPR) repeat-containing protein
38.5746 Ahg934119 transcription activators
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression