Detail



ID : Ahg928932

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928932|scaffold_301389.1
Sequence
TAGTGAAATT AAGATCAAAA ATGGAGAGAT CCATTTCCTT TAATCCTCGA TGCGATAACG AGCTCCCGAA TGATCGGAGC AGCGATGTTG GATATGTTGC TAATGATCGG AGGCTTGCTT ATTCCCGTTC GTTTCAGCAA TCTCACGGTC CACGAACGCC GGCGGTCACG GAAGCAGCTA AGCCTTTTCT CGATAGGACG GTCTCGAGCA TCGATATGCC GCCGGAGATT TACTCCGTCG ACGGGAATGA TGTGTTTTAC GGGGAAGGGA AAGACGTAGA AATAGGAAAA GTGTCTGTTT TGGATATGGT TTGGGAGATT TTTGGAGTAC TGAGAAGTGG AAATCGGCAG ATGAAGAGGT TGTTTCTGCT GATTGCGCTT AATGTCTTGT ATTCTACAAC AGAGCTTTCT ATTGGGATCT TCACTGGGCG TGTAGGTTTG GTCTCCGATG CATTCCATTT GACATTTGGT TGTGGGCTCT TGACATTTTC TTTATTTGCA ATGGCAACTT CAAGGAAGAA GCCTGATCAT GCTTACTCAT ACGGGTACAA AAGACTTGAA GTTTTATCTG CTTTCACTAA TGCTCTGTTC CTTATGTTCA TGTCATTCTC CTTAGCTGTG GAAGCTCTTC ATGCATTTAT ACAAGATGAA TCAGAGCACA AGCATTATTT GATTGTATCA GCCGTAACAA ATCTACTGGT GAACCTACTA GGTGTTTGGT TCTTCCGGAA TTATGCTCGT GTCAATATTG CCTACAGAAA AGCAGAAGAT ATGAATTACC ACTCTGTTTG CTTGCACGTC ATAGCAGATT CCATCCGCAG TGCAGGTTTG ATACTGGCAT CTTGGCTCCT CTCTCTCGGG GTTGAAAATG CAGAAGTCCT ATGTTTAGGG TTGGTATCCG TTACCGTGTT TATGCTTGTT ATGCCACTCT TCAAAGCCAC TGGTGGTGTC TTGCTTCAGA TGGCACCCCC AAACATTCCT TCTTCCGCAT TAAGCAAATG CTTGCGACAG ATTACTTCTC GAGAAGATGT CATGGAGGTT TTACAGGCAC GTTTCTGGGA GGTTGTGCCT GGTCACACTG TGGGCTCACT CAGACTCCAG GTGAAGAGCG GAATAGATGA AAGGCCATTA CTGCAATATG TATATGATGT ATACCATGAT TTGGGTGTAC AAGACTTGAC CCTGCAAACT GATTACACTT GAGCTGCATC TGCGTCATCT TT 
Length1222
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4617507.. 4620442
Download Sequence
A.thaliana
AGI-codeAT3G12100.1
DescriptionCation efflux family protein
TAIR curator summary
Alias[MTP5][metal transport protein 5]
Gene coexpression
MR
MR Locus Description
1 Ahg490803 Ribosomal protein S5 domain 2-like superfamily protein
3.31662 Ahg491180 SAUR-like auxin-responsive protein family
21.6795 Ahg951457 Tetratricopeptide repeat (TPR)-like superfamily protein
45 Ahg492266 C2H2-like zinc finger protein
56.1872 Ahg476853 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
61.441 Ahg325246 hyaluronan mediated motility receptor-related
64.1561 Ahg481833 pumilio 3
64.1872 Ahg485847 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
65.5973 Ahg909718 structural molecules
74.6458 Ahg477969 PAS domain-containing protein tyrosine kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression