| Annotation |
|---|
| Description | jgi|Araly1|487502|fgenesh2_kg.6__636__AT5G06870.1 |
| Sequence |
AAACACACTA TGGATAAGAC AATGACACTG TTCTTGCTCT TGTCCACTCT CCTCCTCACG ACTTCTTTAG CTAAAGATCT CTGTCACAAA GATGACAAAA ACACCCTCCT CAAGATCAAG AAATCCCTAA ACAACCCTTA CCACCTCGCC TCATGGGACC CCAAAACCGA CTGTTGCTCT TGGTACTGTC TCGAGTGCGG CGACGCTACC GTCAACCACC GCGTCACTTC CCTAATCATA CAAGACGGCG AGATCTCCGG TCAGATCCCA CCTGAAGTCG GTGACTTACC GTATCTTACT TCCCTTATCT TCCGCAAACT CACTAACCTC ACTGGTCACA TCCAACCCAC TATCGCCAAG CTCAAGAATC TCACTTTTCT CAGACTAAGC TGGACGAATC TCACCGGTCC GGTTCCTGAG TTTCTGAGTC AGCTCAAGAA TCTTGAGTAC ATTGACCTTT CCTTCAATGA TCTCTATGGT TCCATACCAA GTTCTCTCTC TTCATTACCT AAACTCGAGT ATCTTGAACT TAGTAGGAAC AAGCTTACAG GTCCGATACC AGAGTCATTT GGGACGTTTT CAGGAAAAGT CCCTAGTCTT TTCCTATCAC ACAACCAGCT CTCTGGTACT ATACCAAAAT CACTAGGCAA TCCCGACTTT TACCGCATCG ATTTATCCCG AAACAAGCTT CAAGGCGATG CTTCGATCTT GTTTGGAGCT AAAAAAACGA CATGGATCGT TGATATATCA AGAAACAAGT TCCAGTTCGA TCTCTCCAAG GTTAAGCTCG CTAAGACACT TAATAACTTG GACATGAATC ACAATGAAAT CACAGGGAAT ATTCCGGCTG AGTGGAGCAA AGCTTATTTT CAGTTACTCA ATGTTAGCTA TAACAGATTG TGTGGACGCA TCCCCAAAGG AGAGTTTATT CAGAGATTTG ATTCTTATTC CTTTTTCCAC AACAAGTGTT TGTGTGGTGC ACCTCTTCCC AGTTGTAAGT GAAGATTCAA GCGAAGCCAA GCTTTATCTC TAATGTACCA AATAATCAAT CGTCTCTAAT GA |
| Length | 1062 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2510862.. 2512000 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G06870.1 |
| Description | polygalacturonase inhibiting protein 2 |
| TAIR curator summary | Encodes a polygalacturonase inhibiting protein involved in plant defense response. PGIPs inhibit the activity of pectin degrading enzymes such as those produced by fungal pathogens. PGIP2 is induced by fungal infection and methyl jasmonate. |
| Alias | [ATPGIP2][PGIP2][ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2][polygalacturonase inhibiting protein 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9 |
Ahg928939 | Leucine-rich repeat (LRR) family protein |
| 13.8924 |
Ahg480276 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 15.4272 |
Ahg484604 | TRAF-like family protein |
| 16.2173 |
Ahg485901 | |
| 16.7929 |
Ahg497154 | FASCICLIN-like arabinogalactan 2 |
| 17.72 |
Ahg471076 | Eukaryotic aspartyl protease family protein |
| 18.2483 |
Ahg930141 | Peroxidase superfamily protein |
| 19.105 |
Ahg945946 | SKU5 similar 4 |
| 21.3542 |
Ahg485285 | IQ-domain 21 |
| 22.6274 |
Ahg485020 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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