Detail



ID : Ahg929119

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929119|scaffold_301576.1
Sequence
CTGAAAAGCT TTGATTGAGA AAAATGACGA CGACGACGAC AATGGCTAAT CTTCCAGTAG TTTTGGTAGA GGATATACTC TCTAGGGTTC CGGTGACATC TCTCAGAGCA ATACGATTAA CTTGCACAAC CTGGAACCGT TTATCGAAAA ATCAGATCAT CGGTAAAAAA GCAGCAACAA GGAATCAGTT TCTGGGTTTC ATGTTGATAG ATTTCACGAT TTGTTCAATG AGATTCGATC TCCGAGGAAT CAGCAACAAC GACGACGAAG ACGATGATGA TTTCATTGAT CAATCTGTCA AGGAAGTGAG TGAACTTTAC GAATTCTCGA TATCTCAAAT CTTTCACTGC GACGGCTTGT TGCTTTGCGT CTTCAATGAC ACCAGCAGCA AGACGCTCAT GGTGTGTAAC ATGTACTTGG GGCAAACTAG GAGGGTTAAA GCCCGTCAAT TGTTCGACAG ATTCTCTAAA TCAGGTGTTT ATGCTTTTGG ATACGATGAT AGCGAAGAAA ACCGTAACCA CAAAATCTTG AGAAACGAAA CTAATGGTGG TGGTTATGAG ATCTACGATT TTAGATCCGA TTCATGGAGG CTTCTTGATG TCGTTCCCGA CGGAGATACA AATTTTGGTG AAAAACTAAG CTTGTCTTTG AAGGGAAATG CTTACTTTTT TGTTACAGAG GAATATGATG AGACACTTGT AGTGGAGGGA GAAACACTGT ATTCAAGGGA GAGTCGACTT ATGTTACTCT GTTTTGATTT CACTAGTGAG ACATTTGGAC AGCTTCTGAC TCTGCCGTTT CACTCTCTTG GTGATCTAGT TGTTGATAGT AGTGTGGAGA GTTGGGCTCT ATCTTGTGTT AGAGATGAGA AGCTCGCTGT GTTGTTTCAA CACTATAAGA CTATCAAGAT TTGGACTACG ACTGAGATCG AGCCCAATGC GGTGTCCTGG GATGAGTTTT TGGAAGTGGA CTTGACGATG TTTGGTGGTG TTCCGGATGA TTTTAGAGCT GGGAGCTTCT TTCTTGACGA GGAGAAGGAA GTCGCTGTAG TTTTCGATCA AGAGACCAAG ATGGATCGCA ACCAAACAGC TTACGTCATT GGAAAGGGTG GATACTTCAA ATCTGTGAAT TTCGGAGATG ATCCGCCAAG TTACCGTCTC CCACTTGTGT GCTCTTCTTA CATTCCAAGC TTAGTGCAAC TCAACAAGCA GGCCGAAAGG AAAATCAACA AGCAGGGCAA AAGGAAAGAA AGAGATTATT AGTTGCATCA TCTTCTTTTG TT 
Length1282
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5286774.. 5288052
Download Sequence
A.thaliana
AGI-codeAT1G11810.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
59.5819 Ahg924813 Mitochondrial transcription termination factor family protein
63.1981 Ahg490342 sucrose synthase 3
71.3092 Ahg471006 secretion-associated RAS super family 1
75 Ahg473182 other RNA
83.5464 Ahg480518 Transducin family protein / WD-40 repeat family protein
90.0999 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
90.2884 Ahg489562 Trypsin family protein with PDZ domain
93.4131 Ahg470369 HXXXD-type acyl-transferase family protein
95.6661 Ahg349548
97.6217 Ahg925797 myb domain protein 90
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression