Detail



ID : Ahg471006

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471006|fgenesh2_kg.1__960__AT1G09180.1
Sequence
ACGAAACGAA ACTTTGATTT TTCTCCCGAT TCTGTTCTGG TGTGTGGATT CTAATTAGAT CTGAGGAAGA CGACGTCATG TTTTTGTTTG ATTGGTTCTA TGGAATATTT GCGTCGTTAG GTTTGTGGCA GAAAGAAGCG AAGATCTTGT TTCTAGGCCT CGACAATGCC GGAAAAACTA CTTTACTTCA CATGCTCAAA GACGAGAGAT TAGTTCAGCA CCAGCCAACA CAGCATCCCA CGTCTGAGGA ACTTAGCATT GGCAAAATCA AGTTCAAGGC CTTTGATTTG GGTGGCCATC AGATTGCTCG TCGGGTTTGG AAAGATTACT ATGCCAAGGT TGATGCTGTT GTCTACCTTG TGGATGCTTA CGACAGGGAG AGATTTGTGG AGTCGAAAAG AGAGCTAGAC GCTCTTTTAT CAGATGAAGC CTTAGCAAAT GTTCCCTGTC TTATTCTTGG CAACAAGATT GATATTCCTT ATGCATCCTC AGAAGATGAG CTCAGGTATC ACTTGGGTCT CACCAATTTC ACTACCGGTA AAGGCAATGT CAGTCTTGAA AACTCTGGTG TTCGTCCCCT TGAGGTCTTC ATGTGCAGCA TCGTCCGCAA AATGGGTTAT GGTGAAGGGT TCAAATGGCT ATCTCAGTAT ATCAAGTAG 
Length659
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3339139.. 3340053
Download Sequence
A.thaliana
AGI-codeAT1G09180.1
Descriptionsecretion-associated RAS super family 1
TAIR curator summaryA member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.
Alias[ATSAR1][ATSARA1A][SARA1A][SECRETION-ASSOCIATED RAS 1][secretion-associated RAS super family 1]
Gene coexpression
MR
MR Locus Description
12.6491 Ahg343491 Ubiquitin-conjugating enzyme family protein
23.2379 Ahg943283 NAD(P)H dehydrogenase B2
38.2884 Ahg494266 BAX inhibitor 1
48.5798 Ahg941199 Zinc-binding dehydrogenase family protein
58.7367 Ahg482783 NAD(P)-linked oxidoreductase superfamily protein
66.9925 Ahg937360 ENTH/VHS family protein
69.9142 Ahg479865 MATE efflux family protein
71.3092 Ahg929119 F-box associated ubiquitination effector family protein
76.4068 Ahg888940 Tetrapyrrole (Corrin/Porphyrin) Methylases
78.8036 Ahg930630 cytochrome P450, family 82, subfamily G, polypeptide 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression