| Annotation |
|---|
| Description | jgi|Araly1|946668|scaffold_702897.1 |
| Sequence |
GAGATTCGTA TTAGCAAACC ATGTCTTTGA GACCTAACGC TAAGACTGAG GTTCGCCGGA ATCGCTACAA AGTAGCGGTG GATGCTGAGG AAGGAAGACG GAGGAGAGAG GATAACATGG TTGAGATCCG TAAAAGTAAG CGTGAAGAAA GCTTACAGAA GAAGCGTCGT GAAGGTCTTC AAGCTAATCA GCTACCTCAA TTCGCTCCTT CTTCTGTTCC TGCTTCATCA ACTGTTGAGA AGAAGTTGGA GAGTTTGCCT TCAATGGTTG GTGGTGTTTG GTCAGATGAA AGAAGTTTAC AGCTTGAAGC GACTACTCAG TTCCGGAAAT TGCTTTCTAT TGAGCGTAGT CCTCCGATTG AAGAGGTGAT TGATGCTGGT GTTGTGCCTC GGTTTGTGGA ATTTCTCACG AGAGAGGATT ATCCACAGCT TCAGTTTGAG GCTGCTTGGG CATTGACGAA CATTGCTTCT GGGACTTCAG AGAATACTAA GGTGGTCATT GATCATGGTG CTGTTCCGAT TTTTGTTCAA CTGTTGGCTT CTCAGAGTGA TGATGTCCGT GAGCAGGCTG TTTGGGCATT AGGGAATGTT GCTGGTGATT CTCCACGGTG CAGAGATCTT GTCCTTGGTC AAGGAGCTTT GATACCATTG CTCTCTCAGT TGAATGAGCA TGCTAAACTC TCAATGCTGA GAAATGCTAC TTGGACCCTC TCAAATTTCT GCAGGGGCAA GCCACAGCCT CCCTTTGACC AGGTCCGTCC AGCACTTCCA GCCCTTGAAC GCCTGATTCA TTCGACTGAT GAGGAAGTGT TAACGGATGC ATGTTGGGCT CTCTCTTACC TTTCCGATGG CACAAATGAC AAAATCCAAT CTGTCATTGA GGCAGGTGTT GTTCCTCGAC TCGTCGAGCT TCTCCAGCAT CAATCACCTT CTGTGCTTAT TCCTGCGCTT CGTAGTATTG GTAACATTGT CACTGGAGAT GATCTGCAGA CACAGTGTGT AATTAGTCAT GGTGCACTTC TTAGCCTTTT GAGCCTTCTG ACTCACAATC ATAAGAAGAG CATCAAAAAG GAAGCTTGCT GGACAATCTC AAATATCACT GCTGGAAACA GGGACCAGAT TCAGGCTGTT TGTGAAGCTG GTTTGATTTG CCCTCTTGTC AATCTGCTTC AAAATGCGGA GTTTGATATA AAGAAAGAAG CTGCATGGGC AATATCAAAT GCCACTTCAG GCGGTTCTCC CGACCAGATC AAGTACATGG TGGAACAGGG AGTCGTGAAA CCACTGTGTG ATCTTTTGGT GTGCCCTGAT CCAAGGATTA TCACAGTGTG TCTGGAAGGA TTGGAGAACA TTTTGAAAGT CGGGGAAGCT GAAAAGGTTA CAGGAAATAC CGGGGATGTA AACTTTTATG CACAGCTGAT CGATGATGCT GAAGGTTTAG AAAAGATTGA GAATCTGCAG AGTCATGACA ACAGCGAAAT CTATGAGAAG GCAGTGAAGA TTCTTGAAAC GTACTGGTTG GAAGAGGAAG ATGAAACTTT ACCACCTGGT GATCCCTCCG CACAAGGCTT CCAGTTTGGA GGAGGTAATG ATGCAGCCGT ACCGCCAGGA GCTGAGCATG ATGAGTGTGA AGAGTCGAAG CAGGTTTATA TGTTTTTTAA GTGTGATGAG AATGTGTCTC TCTGGGTTTT TGTTACATTT GTACTACACA ACACTGCAAA GTCAAACATA AAAAAGTTGG TCAAACTTTA TTTGGTCTTG TTGGTGACAT AAAAGCCCAA TTGGTTCGTC CT |
| Length | 1792 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 11554492.. 11557850 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G16143.1 |
| Description | importin alpha isoform 2 |
| TAIR curator summary | Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. |
| Alias | [IMPA-2][importin alpha isoform 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg474459 | phosphoenolpyruvate carboxylase 1 |
| 4.89898 |
Ahg483691 | WD-40 repeat family protein / beige-related |
| 6 |
Ahg477103 | Ca(2)-dependent phospholipid-binding protein (Copine) family |
| 7 |
Ahg470078 | SEC7-like guanine nucleotide exchange family protein |
| 8.48528 |
Ahg318458 | calmodulin binding;transcription regulators |
| 8.83176 |
Ahg471723 | CASC3/Barentsz eIF4AIII binding |
| 11.3137 |
Ahg936983 | |
| 11.6619 |
Ahg944613 | myosin, putative |
| 13.6382 |
Ahg496189 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
| 14.1421 |
Ahg929717 | C2 domain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|