Detail



ID : Ahg930011

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930011|scaffold_302468.1
Sequence
TGTAAAAATT AAAAAATTAA ATATGGAATC TCCAGATGAA AGAAACGGTA ACGACGTCCG ACAACCGTTG CTGGAGAAAA TTCCGGCGAA GAAAGAAGCG GAGGGAGAAG AGAGATTGTG CATAGATGAG ATGTTACAAA GATACTGCGG CGAGTTTGGT AGGTGGCAGC TGAAACACTT TGTGTTGACG TGTATTGCTT GGGCTTTAGA GGCGTTCCAC ACGATGGTTA TGATATTTGC CGATCAAGAA CCCGAGTGGA GATGCGTCGG GTTGGATTGT CGGGTCGGGT CATCTAACTG CGATATGGAT CCGAGTTCCT GGGAATGGAC GGCGGGTAAA GGGAGCTCCA CGGTGTCGGA GTGGGGATTG ATTTGCGGTG AGAAGTATAA AGTTGGTCTT GTTCAAGCTC TTTTCTTCGC CGGATGCATG ATCGGTGCAG GAGTATTCGG ACATCTATCG GACTCCAAGC TAGGAAGAAA AGGCTCGCTA ACAGTTGTTT GCATTATCAA CGCAATCTTT GGTATCGCAA CAGCTTTCTC CCCAAACTAT TGGACCTATG TGGTTCTCCG GTTCTTGACT GGTTTCAGCA CCGGTGGTGT TGGCCTAACT GCGTTTGTCC TAGCCACTGA ACCCATAGGA CCAAGCAAAC GTGGTGTAGC CGGAATGTCA ACTTTCTACT TCTTCTCTGC CGGCATTGCA CTTCTCTCCG GCATTGCTTA CGTTTTCAGA TCGTGGAGGG AGCTTTTTAT AGTGTCATCG TTACCGTCTC TCTTGTTCCT ACTCATTGTT ATCCCATTCA TCTCCGAGTC CCCTAGGTGG TATCTCGTGA GAGGCAAAGT AGACGAGGCG ATGAAGTTGA TGCATTTGAT CGCTAAAACG AACGGGCGCC ACATTCCCGC TGGAGTCACT CTTGCTCTTG ACGACGACGT GGAAAATAAA AACGGAGAGA GGAATACTGC TGTTGAGGGT TCGCTCAAGG ATGTTATACT GTCGCCTCTC ATGCGGATCA GACTTCTCAT TTCGGTTGCC ATAAGTTTCA CAGTCTCGAT TGTATACTAC GGACTAAGCC TCAACGTAGT CAACCTCAAG ACCAATCTCT ACCTCAACGT CTTTGTCAAC GCGGTGTCGG AAATGCCCGC ATTTGCTATA ACCGCGGTTT TACTAGACAA GTACGGGAGG AAACCGCTGT CCATAGGGAC ACAGTGGTTC AGCTGCGTTT TCTGTCTCGT AGGATTCGCT GTATGGGGAG CTGGTCCATG GAAATCGGTT AGAATGGTGT CAGGGGTTTT AGGGATATTC GGGATGGCAG GAACGTACAA TCTTCTGTTC ATATACATCG CAGAGCTGTT TCCAACAGTG GTGAGGAACG CAGCATTGGG TTGTGCGACT CAAGCAGCTC AAATGGGAGC AATTCTGGCG CCTTTTGTGG TGGTTTTAGG GGAGGAGTTA CCTTTTGGGG TGTTTGCGGT TTGCGGGTTA GTGGGAGGTG GGCTTGCGTT TTACTTGCCG GAGACGTTAA ACAAGCCGTT GTATGACACA ATGTCTGGAA TGCACGAAGC TGAGAGTGAG AGTAACAGAG GAAGAGGAGA AGTAATATGT TAAAGAAACA GAATTTACTC TTA 
Length1623
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8578276.. 8582269
Download Sequence
A.thaliana
AGI-codeAT3G20660.1
Descriptionorganic cation/carnitine transporter4
TAIR curator summary
Alias[AtOCT4][OCT4][organic cation/carnitine transporter4]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg485583 phosphate transporter traffic facilitator1
10.3923 Ahg496163 Concanavalin A-like lectin protein kinase family protein
11.9164 Ahg477854 phospholipase D P2
14.1774 Ahg488984
18.7617 Ahg932008
19.5959 Ahg895419 Cornichon family protein
20.2978 Ahg317759 Lipin family protein
20.4939 Ahg485654 purple acid phosphatase 22
22.7156 Ahg910535 alpha/beta-Hydrolases superfamily protein
26.8328 Ahg472569 Calcium-dependent lipid-binding (CaLB domain) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression