| Annotation |
|---|
| Description | jgi|Araly1|930934|scaffold_303391.1 |
| Sequence |
TCTAGAAATC ATCATTCATC ATGCCGGTGA GTTTGACTCC GAACGCCATC ACGGCGATAA ACGACGGCGA CGTGAATTTG AAGCCGTTGT TACAGGTTTT AGAAATCAAA ATAATAGGAA GAAGTCAAGA GAGAAGCCAA GAGAGGTATC GTTTCCTCAT TTCCGATGGT GTTTCAGCTC AACATGCTAT GGTTGCGGTT CAGCTTAATG ATCGAGTCAA ATCAGGACAA GTTGAGAAAG GATCCATCGT TCAGCTGATT GATTACATTT GCAGCGACGT TAAAGGCCGC AAGCTTATTT TGGTGCTGAA TATGGAGACG ATAGTACCAC ATTCTGAAAC CATCGGGAAC CCCACAATAT TTGGAGAAAC AGATACAGAA GCCCAGAAGC CGCTTTCAGC TATGGGTAAT ATACCGCCTC CGAACAGGGT TGTTTTTAAT GAACCAACGG CTCAGCATTC TGTTAATAGA GCACCTCCCA GGGGCGTAAA CATTCAAAAT CCAGCCAACA GTACTCCAAG TTTCAGGCCT TCTGTTCAAC CTTCATATCA ACCGCCTGCA AGCTACAGAA ATCATGGACC CATAATGAAG AACGAGGCTC CAGCTCGAGT CATCCCTATT GCTGCTCTCA ATCCATACCA AGGTCGGTGG GCTATTAAGG CTAGAGTAAC TGCGAAAGGA GATATCAGAC GATACAACAA TGCAAAAGGA GATGGAAAGG TTTACTCCTT TGATCTGCTT GACTCTGATG GAGGGGAGAT TCGGGTTACC TGCTTTAATG CTGTTGCTGA CCGATTCTAT GACGTTACTG AGGTTGGTAA GGTATATTTG ATTTCAAAGG GAAGCTTGAA GCCTGCACAG AAAAATTTCA ACCACTTAAA GAATGAATGG GAAATTTTCT TGGAGTCAAC ATCGACTGTG GAGCTTTGCC CTGATGAAGA TGGCTCCATA CCAAGGCAGC AGTTCTCTTT CCGTCCTATA GGTGACATTG AGAACGCCGA GAACAATACC ATACTCGATG TCATTGGGGT TGTGACTTCT GTGAACCCCT CGGTGCCAAT CTTGAGAAAG AACGGGATGG AAACCCATAG GCGAATCCTG AATCTGAAGG ATGAATCGGG AAAAGCTGTA GAGGTAACGC TATGGGGAGA ATTCTGTAAT CGAGATGGTC GGCAACTGGA AGAGATGGTT GATTCAGCTT TTCATCCGGT TTTAGCAATA AAAGCTGGAA AAGTAAGCGA CTTCAGCGGG AAATCAGTGG GGACAATATC TTCAACACAG CTCTTCATAA ATCCAGATTT CCCTGAAGCT CATAAACTAC GGACCTGGTT CGATCACGGG GGAAAAGACA CTGCTTCCTT CTCCATCTCC AGGGACACTA TGCCTGGAGG AGTTTCCAGG AACGAGATAA GAAAAAGTGT TTCTCAGATC AAAGAGGAAG GTCTTGGAAG ATCAGATAAG CCTGACTGGA TCACTGTGAA AGCAACCATA TCATTCATCA AAACAGATAG CTTCTGTTAT ACAGCTTGTC CTTTGATGAT CGGAGATAAA CAATGCAACA AGAAGGTGAC ACGGTCTGGA ACAAACAGGT GGCTCTGTGA CCGGTGCAAC CAAGAGTCTG ATGAATGCGA CTACAGATAC CTTCTTCAGG TGCAGATTCA AGACCACACT GGGTTGACTT GGATAACCGC ATTCCAAGAA ACGGGAGAAG AAATCATGGG ATGTCCGGCT AAGAAGCTTT ACGCATTGAA ATACGAATTG GAGAAGGAGG AAAAGTTCGC AGAGATTGTT AGAGACAGAC TGTTTCATCA ATACATGTTG AAGCTAAAGA TCAAAGAGGA ATCGTATGGG GATGAACAAA GAGTGAAGAT GACTGTTGTG AAGGTGGATA AGGTGAATTA TACATCAGAG AGTAAATACA TGCTTGATTT GCTCGTAAGG TAAAACAGTG AGAGATTTCA ATTA |
| Length | 1964 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 13765246.. 13767784 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G06510.1 |
| Description | replication protein A 1A |
| TAIR curator summary | Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I. |
| Alias | [ATRPA1A][ATRPA70A][RPA1A][RPA70A][ARABIDOPSIS THALIANA REPLICATION PROTEIN A 1A][ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT A][replication protein A 1A][RPA70-KDA SUBUNIT A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.43398 |
Ahg496587 | chromatin remodeling 24 |
| 22.7156 |
Ahg492483 | PHD finger protein-related |
| 38.4187 |
Ahg922760 | Endoplasmic reticulum vesicle transporter protein |
| 38.923 |
Ahg941254 | |
| 48.4768 |
Ahg477936 | DNAJ heat shock N-terminal domain-containing protein |
| 50.5964 |
Ahg496070 | telomeric repeat binding protein 1 |
| 57.2014 |
Ahg479265 | pyrimidine 1 |
| 57.6021 |
Ahg938002 | DHHC-type zinc finger family protein |
| 59.8665 |
Ahg312653 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 65.1153 |
Ahg491481 | Plant Tudor-like RNA-binding protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|