| Annotation |
|---|
| Description | jgi|Araly1|496070|fgenesh2_kg.8__1886__AT5G59430.4 |
| Sequence |
GTCTTTCTTA AGGGTTTTTG TTTTTGTGGC GTTTCACAGA GAGAGAGAAA TAGAGATTGT TTTTGCTTGT GGTGAGAGAA GATCGCATCG TGTGGGTAGC GTTTCAAACA AGTAAAAAAA AAAAAGATAA AAAAAAGTTT CCGTCACTTT CTCGAGGAAG AAGGGGTTTT GGTGTGAGTC CTTCGTTTGC GTTTGTCTTT TCATTTTCCG ATCTCGTAAT TGTCGTGTTA TTCGCCGGAA AAGTGAAGAT TGAGATTTAA AAGGTTGCGA ATTACCTTCA CAGGATTTTG TTGATTGGTG TGATTCTAAG CCATTGATCA ACAAGCTTTT TTTCGTGTGG CAATCACATA ATCGTGTTAT GCATTCTGAG AAATGGTGTC GCATAAGTGT GTAGAAGAAG TTGGATACAA AAGCTACCTG TTACCTGCCA ATGCAAGAGC ACCCAGATCC GCCCGGAAGA GGCGTAGTAT CGAGAAGACG ATAAGTGAAG ATGATAATAT GTGTGCAATT GATTTATTGG CCACCGTAGC TGGACACTTG TCATTTGAGA GCGGGAGTTC TATCGACAAA CTGATTGAAG ATCATCGTGT AGTTACACAA AAGAGTGTAA AGGAGGAATT CCTGGAGGAA GAAAAACCTC TAATGCCGGA AGCTTTATCC GGTGAAAATC CTTATCAGGG ATCTTTGAGC CCCAGCGGTT TTAGTTCTGT GATAAATGGC AAAGTAGAGA ATGAGGCAGA TGGTTTTAGT TACTCTGGTG GTAGTGATGC TTGTCAAGTT GGGAGCTTCA GTCAAGATAT AAAACCGGGC ATCGATGGCG ATGCAGTAGT TCTGGATGCG AGACCTAATG TTGTAGTTAG TTTAGGTAGT AGTAGTAGAA CCGAAGTGCC ATCAATTGGG AATTGTGCTT CCCATGGCAT TCGGGATGAT GTAAATTTGT TTAGTAGAGA TGATGATGAA AACTTTTCTG GGTACATTCA CCCGCGTGTT ACAAAAAATT CACCTAGGAC TGTGCCGCGT ATTGGGGACA GAAGAATCAG GAAGATATTG GCTTCTAGAC ATTGGAAAGG AGGTTCAAGA CATGCAGATA CGAAACCATG GAGAAATTAT TACTTGCACC ATCAGAGGAG CTATCCTATC AAGAAAAGGA AAAACTTTGA CCACATATCT GATTCAATTA CTGATGACTA CCGTTTGCGC ACTAAGATGC ATAGAGGCAG CAGAAAAGGT CAAGGTGCAT CCTTTGTGGC AAGCAACTCC CATGTGAAAC TACGGATCAA GTCGTTCAGG GTGCCTGAGC TTTTCATAGA GATTCCAGAA ACTGCTACTG TTGGCTCCTT GAAGAGAATG GTGATGGAAG CAGTGAGCAC TTTACTGAGT GATGGACACC GAGTTGGTCT GATGGTTCAT GGGAAGAAAG TCCGTGACGA TAACAAAACC CTTCATCAGA CTGGGATCTC TCAGGATAAC ACCCACTTGG ACTCTCTTGA TTTTAGCCTT GAACCCAGCT CAGATATGCC TCAACTGTTA ACTAGTCACC CGTCGGGACA TGCTTCTGGG GAGCTGCTAC CTGTGTGCCA AGCTGCTAAC ATGGACAATG TGTTGGAATC TGACCATCAT GACTCAGCAC TATTCCCATC TGACTCATTA GGCAAGAATA ACGTGACAGA AGATTCTAAA GCTATGATTC CTGTGGCGCT CACTGAATTG GCTTCTCGAC CACCTTGTCT TAAACTTAAG AGAAGTGAAC AGCAGCAGCA GCAGGCTGCA CAACGCAGAA TTCGTCGACC TTTCTCAGTT GCTGAAGTAG AAGCACTTGT TCAAGCAGTT GAGAAACTCG GTACTGGAAG GTGGCGAGAT GTTAAGCTTT GTGCTTTCGA GGATGCAGAC CACCGCACTT ACGTCGATCT CAAGGATAAA TGGAAAACGC TGGTCCACAC GGCTAAGATA TCTCCACAAC AGAGGAGAGG AGAGCCAGTG CCGCAGGAAC TTCTAAACCG AGTCTTGAAA GCTCATGGCT ACTGGACACA GCAACAGATG CAGCTGCAGC AACCAGAGAC ACAGGCTCAA ACGACAGAGG CTCTGCTGCT TCTCTAATTG AATTTGCTGC AGGCTGGAGG TCGTCTCTCC TATGTGTATT ACTACTATTG ATGATAATGT AAGATTCTGA CATAGATGCA AAGATTTGGT CTTTTACTTG TTTCTTGGTT TCTTTGTTTT AACTTTTCTC AATGTAAAGT TTTGAACTGG AATAAGGTTT TTCTGACCAG TTTAGGGCTT TAGAGGATCT CTTGTACATT TTTTGTGACA TTCTCTTTAC ATATTTCTTA TCTAGACTTT |
| Length | 2340 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 17949042.. 17952721 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G59430.1 |
| Description | telomeric repeat binding protein 1 |
| TAIR curator summary | Encodes a telomeric repeat binding protein with a DNA binding domain at its C terminus. The DNA binding domain has a preference for GGTTTAG sequences and at least five of these repeats are required for recognition by a nearly full-length TRP1 protein. |
| Alias | [ATTRP1][TRP1][TELOMERE REPEAT BINDING PROTEIN 1][telomeric repeat binding protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.16441 |
Ahg926384 | anthranilate phosphoribosyltransferase, putative |
| 12.2066 |
Ahg493257 | RNA binding;abscisic acid binding |
| 12.9615 |
Ahg491042 | |
| 13.0384 |
Ahg940356 | DDT domain-containing protein |
| 20.199 |
Ahg492821 | JUMONJI 14 |
| 22.9783 |
Ahg926055 | Protein of unknown function (DUF707) |
| 24.9199 |
Ahg938385 | basic leucine zipper 25 |
| 26.4386 |
Ahg352549 | RNI-like superfamily protein |
| 26.8328 |
Ahg935633 | auxin response factor 11 |
| 27.3861 |
Ahg493786 | conserved peptide upstream open reading frame 58 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|