| Annotation |
|---|
| Description | jgi|Araly1|931357|scaffold_303814.1 |
| Sequence |
TCCGTCGGTG GTTTCGGTAA AAAATGGAGG AAGCTTTAGA AATGGCGAGA GCCAAGGATA CAAAAGAGCG CATGGCGGCT GTTGAAAGGC TACATCAACT TCTCGAAGCT TCTAGGAAGA GTTTGAGTCC ATCGGAAGTG ACGTCACTTG TTGATTCTTG TTTGGATCTC CTTAAGGATA GTAATTTTAG AGTCTCTCAA GGTGCGCTTC AAGCTCTTGC TTCTGCTGCT GTTCTTGCTG GTGAGCATTT GAAGCTTCAT TTGAATGCTC TTGTTCCTGC TGTTGTCGAG CGGCTCGGTG ATAGCAAGCA ACCTGTTAGG GATGCTGCGA GACGTTTGTT GACGACTCTA ATGGAGGTTT CATCTTCAAC TATTATAGTT GAAAGAGCGG GTTCTTATGC TTGGATGCAT AAGAGTTGGA GAGTTAGGGA AGAGTTTGCG CGTACTGTTA CATCGGCTAT TGGTCTTTTT GCATCTACGG AACTTCCTCT TCAGCGGGTT ATACTTGCTC CGATACTTCA GATGTTAAAT GATCCCAATC AAGCAGTTAG GGAAGCTGCA ATTTTGTGCA TTGAGGAGAT GTACATGCAG GGTGGGTCTC AATTTCGAGA AGAGCTTCAA CGCCACCATC TTCCATCATA TATGGTGAAG GATATTAATG CTAGACTGGA ACGTATTGAG CCACAGCAGC GTTCTACAGA TGGCCGTAGT GGTCACCATG TTGTTAATGA GGTTAAGGCA TCAAGTGTCA ATCCCAAAAA GAGTAGTCCC AGGGCAAAGG CTCCCACGCG AGAGAACTCT TTATTTGGGG GAGATGCCGA CATCACTGAA AAACCCATTG AGCCAATCAA AGTGTACTCA GAGAAGGAGC TGATACGAGA ATTTGAGAAA GTTGCTGCAA CACTCGTCCC AGAGAAAGAC TGGTCAATGC GTATTTCAGC TATGCGGAGG GTTGAGGGAC TTGTTGCAGG AGGTGCGACT GATTACTCTT GCTTTCGAGG TCTCCTGAAG CAACTTGTTG GCCCCTTAAG TACACAATTA GCTGACCGGA GATCTACCAT TGTTAAGCAG GCCTGTCATC TATTGTGTCT CTTATCAAAA GAACTACTGG GAGATTTTGA AGCATGCGCT GAGATGTTTA TTCCAGTGCT TTTCAAGCTG GTTGTGATCA CTGTGCTTGT AATTGCAGAA TCTGCTGATA ACTGCATAAA AACGATGCTG CGTAACTGCA AAGCTGCCCG TGTACTTCCT CGCATAGCTG AATCAGCAAA ACATGACCGT AATGCAATTC TGCGAGCAAG ATGTTGTGAA TATGCATTGT TAACACTCGA ACATTGGCCT GATGCTCCAG AAATTCAACG ATCAGTTGAT TTATATGAGG ATCTGATTAG ATGCTGTGTT GCAGATGCTA TGAGTGAGGT ACGGGCAACT GCTAGAATGT GCTACAGAAT GTTTGCAAAA ACTTGGCCGG ATCGTTCTCG TCGGTTGTTT TCCTCCTTTG ACCCTGTCAT TCAAAGGCTA ATAAATGAAG AAGATGGTGG AATTCATAGG AGACACGCCT CACCATCTGT CCGTGAGAGA CATTCCCAGC CTTCATATGC TCAGACGTCT GCTCCTTCTA ATCTACCTGG CTATGGAACA TCAGCTATAG TCGCTATGGA TAGAAGCTCA AATTTATCAT CTGGAGGATC ACTTTCTTCT GGGTTACTCC TTTCGCAATC AAAGGATGTC AATAAAGGTT CTGAACGTAG TCTGGAAAGT GTGTTACAAT CAAGCAAGCA GAAGGTCAGT GCAATTGAAA GTATGCTCCG AGGACTGCAT ATATCTGATA GACAAAACCC TGCAGCTCTT CGTTCAAGTA GTTTGGATCT AGGAGTTGAC CCTCCATCGT CTCGTGATCC TCCTTTCCAT GCTGCTGTTC CAGCATCCAA TAATCACACA AGTAGTGCAG CTGCTGAATC AACACATAGT ATCAACAAAG GCAGTAATCG CAATGGTGGC CTTGGTTTGT CAGATATCAT CACCCAAATT CAAGCTTCAA AGGACTCAGG AAGATCATCT TACCGTGGCA ATCTGTTGTC CGAGTCTCAT CCTACCTTTT CATCCTTGAC AGCTAAACGG GTCTCCGAGA GAAATGAGAG AAGTTCTCTT GAGGAAAGCA ATGATGCCAG AGAGGCGAGG CGGTTTATGG CAGGGCATTT TGACAGACAG CAGATGGATA CCGCTTATAG AGATTTGACT TTCAGGGAAT CAAACGCTAG CCATGTTCCC AATTTCCAGA GGCCACTTTT GAGGAAGAAT GTTGGGGGAA GAATGTCCGC AGGCAGGAGG AGGAGTTTTG ATGATAGCCA ACTGCAAATT GGTGACATAT CAAATTATGT TGATGGTCCA GCTTCCCTGA ACGAGGCCCT TAACGACGGA CTGAACTCAA GTTCTGATTG GTGTGCCAGA GTTGCAGCTT TTAATTTTCT CCAAACTCTG CTGCAGCAAG GCCCAAAAGG TGCTCAAGAA GTAATTCAAA GTTTCGAGAA AGTAATGAAA CTATTTCTCC GGCATTTGGA TGATCCTCAC CACAAGGTCG CACAAGCAGC ACTGTCGACA CTCGCAGATC TTATACCATC TTGCCGAAAG CCTTTTGAGA GCTACATGGA AAGAGTCCTA CCCCATGTCT TTTCACGGCT AATCGATCCT AAAGAGGTAG TTAGACAACC TTGCTCCTCA ACCTTGGAAA TTGTCAGCAA AACCTACAGT GTGGATTCCC TTTTGCCTGC ATTGCTTCGT TCACTGGATG AGCAGAGATC ACCAAAGGCT AAATTAGCTG TGATTGAATT TGCCATCAAC TCCTTCAACA GGTACGCTGG TAACCCTGAA ATTTCGGGTA ATAGTGGCAT CTTAAAGTTG TGGCTGGCAA AGTTGACGCC ATTAACCCGC GACAAAAATA CCAAGTTGAA AGAAGCTTCC ATTACTTGCA TCATATCTGT TTACAATCAT TATGATTCTG CGGGACTGCT AAATTACATT CTTAGTTTGT CGGTTGAGGA GCAAAACTCT CTGAGAAGAG CCCTCAAACA ATATACTCCC CGCATCGAGG TGGACCTGTT AAACTATATG CAGAGTAAAA AGGAAAAACA GAGAATAAAG TCTTATGACC CGTCTGATGC CATTGGGACA TCATCTGAGG AAGGATATGC TGGTGCCCCC AAGAAGAATA TATTCCTTGG CCGGTATTCT GGGGGTTCTG TTGACAGTGA TAGTGGCAGG AAGTGGAGTT CTTCCCAGGA GCCAACAATG ACCACTGGTG GTGTTGGTCA AAGTGTTTCC AGTGGAACCC AGGAAAAGCT GTATCAGAAC CTCAGAACTG GGATCAGTTC AGCTAGTGAT CTGTTGAACC CCAAGGATTC TGATTACACA TTTGCTTCAG CTGGTCAGAA TTTGATATCA AGAACTAGCC CTAATGGAAG CTCAGACAAC ATCGAAATCT TGGATGACTT ATCTCCACCA CATTTGGAGA AAAATGGTCT GAATCTGACA AGCGCTGATT CCTTGGAAGG AAGACATGAA AATGAGGTCT CCCGCGAATT AGATTTAGGT AACTACATGC TTGCATCTAT AAAGGTCAAT CCAACACCGG AATCTGGACC TAGCATTCCT CAGATTCTAC ATATGATCAA CGGGAGTGAT GGAAGCCCTT CTTCCAGCAA AAAATCTGGA CTCCAGCAAT TGATTGAAGC CTCTGTAGCT AACGAGGAAT CAGTTTGGAC CAAGTACTTC AATCAAATTT TGACTGTGGT TCTTGAAGTG CTCGATGACG AAGATTTTTC AATCAGAGAG CTTGCTCTTT CACTGATTTC TGAAATGCTA AAGATCCAGA AAGATGCCAT GGAAGATTCT GTTGAAATAG TGATCGAAAA GCTGCTTCAT GTCTCAAAGG ACACTGTTCC AAAAGTTTCC ACTGAAGCTG AGCAATGTTT GACCACGGTC TTGTCCCAAT ACGATCCTTT CAGATGCTTA AGTGTTATTG TCCCATTATT GGTGACGGAA GATGAGAAAA CTCTTGTCGC TTGCATAAAT TGTTTAACGA AGCTTGTGGG TAGGCTCTCG CAAGAGGAAT TAATGGATCA GTTGTCGTCT TTTTTGCCGG CGGTTTTTGA AGCATTTGGG AGCCAAAGCG CAGATGTCCG CAAGACAGTG GTGTTCTGTC TGGTAGACAT ATATATAATG CTTGGGAAAG CATTTTTGCC GTATTTGGAA GGTCTAAACA GCACGCAGGT TCGTCTAGTG ACCATCTACG CAAACCGGAT CTCGCAGGCT AGAACCGGTG CTCCTATCGA TGCAAACACC TGACGAACGG CGTGTACTTC TTG |
| Length | 4363 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 19440312.. 19447537 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G20190.1 |
| Description | CLIP-associated protein |
| TAIR curator summary | Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability. |
| Alias | [ATCLASP][CLASP][CLIP-ASSOCIATED PROTEIN][CLIP-associated protein] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg316204 | |
| 6.9282 |
Ahg930466 | putative type 1 membrane protein |
| 11.0454 |
Ahg484193 | ammonium transporter 1;1 |
| 11.1355 |
Ahg487264 | pentatricopeptide (PPR) repeat-containing protein |
| 13.1149 |
Ahg471301 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 13.8564 |
Ahg478454 | Clathrin, heavy chain |
| 15.2315 |
Ahg934591 | SCAR homolog 2 |
| 16.1245 |
Ahg472902 | |
| 18.4932 |
Ahg481432 | Protein of unknown function (DUF810) |
| 20.4939 |
Ahg472131 | inter-alpha-trypsin inhibitor heavy chain-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|