Detail



ID : Ahg930466

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930466|scaffold_302923.1
Sequence
CGTCGACTTT CGTTGTTAAA GATGAAAACT TTCTACGTAC TCGTCGTCTC TCTTCTTCTC ACACTCAATT ATAGGGGAGA AGCAAGTGGT TCTGTTTTCT TCATTGATGG ATCCAATAAC CAATTTCTTC GTCCACGATC ATCCAGCGAG GCACTTCCCA TGTCGCCTTC TGAAATATCG TCAGCAGTGT CTGCCTTGTT GGGTTTTGCA CCTTCAGCAA CTTTGACAGC TGATGGCTCA TCCAAGCTGA ACAAGATTCT AAAACCTAAT CCATTTGAGA GGCCTCGTGC TGCTTTTGTG CTAGAAATCG CTGGAGCTGA TGATGTGCTT GTGGAAACCT CCCCTAGTCA TCCTTTCTTG GGAAATGCCA TAAGGAGCAG TATTAAGTCT GATTCATACA AAGCTGACAC TGAACTTCCA GACAGTGAAG TGGTTTTTGT GTCTGTCAAT GAACCCGCAT CTGATGTGAC TGACAAGGAC ATAAATGATT TTGCATCTTG GTTGGGTGGA TCATATGTTG CTGGCTCTGC TGAACAATTG TCTGGATTGT TGAGTGTCCC TCTGGCTGGG GGTGCTAATG TGGAGTTCAA TTTAGAAAAG GAAGCAGAGA GGAAATTTGT ATTGAACCTT TTGGGTCTAT ATCAGAATAT CAGACGGGCA GTCAGCGTTC ATGACGATTT ATCTCATGGT ATTGAGAGAA CTGCTGAATT AACGGTTGGA CGCTTTGGTG GTATCAATGC TTTAGCACAG GAGTATGGAC AAGGTATGGC TAAGCAAGGC ATGAATGTAT TGCTTTCCAC ACTATCTAAG CTATTCAATC TGTTGGAGAC TTCTCATAAA GGCCAAATTG TTGGGGTTAT CGTCCTTGAT GAGAGAGTAA ACCAAGAATC AACAAATCTT TTGAACTTTG GGTCTTCTCG TTCATCTGCA CGCTCAATGG CGGAAGTAGA GGGAATTCCA AGTGCAGCAA TTATCGCTGA GGTTATACTT GTTAGGCTGA CTCTTGCATG GTTGACTGGA ATCATTCTTC TCATTGCAAC TATCCTTGGG GTGTACTTCC TTATGAACAT GCCTTTGACG AAGGATACGC TTTTATATTC AAACGTGAAG CTCGACTAAG AGATGAAACG GAGCTTAAA 
Length1139
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10638112.. 10641014
Download Sequence
A.thaliana
AGI-codeAT3G24160.1
Descriptionputative type 1 membrane protein
TAIR curator summaryEncodes a putative Type 1 membrane protein (PMP).
Alias[PMP][putative type 1 membrane protein]
Gene coexpression
MR
MR Locus Description
6 Ahg891118 Endomembrane protein 70 protein family
6.48074 Ahg931978 lipoic acid synthase 1
6.9282 Ahg931357 CLIP-associated protein
7.87401 Ahg926404 Phosphoglucomutase/phosphomannomutase family protein
8.06226 Ahg487168 Iron-sulphur cluster biosynthesis family protein
9.79796 Ahg490460 adenine nucleotide transporter 1
11.0905 Ahg951066 1-deoxy-D-xylulose 5-phosphate reductoisomerase
21.2368 Ahg474400 histone H2A protein 9
22.0454 Ahg949999 embryo defective 2737
22.4499 Ahg471438 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression