| Annotation |
|---|
| Description | jgi|Araly1|919881|scaffold_101162.1 |
| Sequence |
AAGTTTGATT CAGTGACAAG AAAGCATGAG TAACTCTGTA GTGCATAACA TACTAAACCG GGGTTTGATT CGTCCTCTTA ACATTGAACA TCAAAACAAG CTCAACTCGT CTGTGTACCA AACCTCAACG GTAAATTCGG CTGTTGGGAA GATTGGCAGA TCAAAACTCT ACGGGAAAGG TCTTAACAAG GCAGGACGGA GTCTGATCAC TGAAAGACCT CTCTCATTTG TTCCACGAGC TGTTCTTGCC ATGGATCCTC AGGCAGCCGA GAAATTTAGT CTTGACGGTA ATATTGACTT ACTGGTTGAA GTCACTTCTA CAACTGTAAG AGAAGTAAAT ATCCAGATAG CATATACAAG TGACTCATTG TTTCTACACT GGGGTGCAAT TCGTGACAAC AAAGAAAATT GGGTTCTACC TTCTCGCTCT CCGGATAGAA CTCAAAACTA CAAGAACAGT GCCCTTAGAA CTCCATTTGT AAAATCCGGT GGCAATTCTC ACCTTAAACT AGAGATAGAT GATCCTGCCA TACACGCTAT TGAGTTCCTT ATATTTGACG AGAGTCGGAA CAAATGGTAT AAAAATAATG GTCAGAATTT TCATATACAC TTACCAACGG AAAGGAATGC GAAACAAAAT GTTTCTGTTC CTGAAGATCT TGTACAGATC CAAGCGTATC TTAGATGGGA ACGTAAGGGT AAACAAATGT ATACCCCTGA GAAAGAGAAG GAGGAGTATG AAGCCGCCCG CATGGAGCTA CAGGAGGAAG TGATGCGAGG TGCTTCAGTG GAAGATCTCA GAGCAAAGTT GTTGAAGAAA GATAACACTA ATGAATCCCC AAAGTCTAAT GGGACTTCAT CCAGTGGACG GAAGGAAAAG AAAAAACTTT CCAAGCAACC AGAGCGTAAA AAAAATTATA ACACTGAGAA GATCCAGCGC AAGGAAAGGG ACCTGAATAA GCTTATCTAT AAGCATGTTG CTGATTCTGT TGAACCAGAA TCCAAATCCT CATCTGAACC ACGGTCCTTA ACAACCCTGG AGATATACGC CAAAGCAAAG GAGGAACAAG AAACCACTCC AGTCTTTAGC AAGAAAACAT TCAAGCTTGA AGGCAGTGCG ATTTTGGTGT TTGTTACTAA ACTTTCCGGA AAGACGAAAA TTCATGTGGC AACCGATTTC AAAGAGCCGG TTACCCTTCA CTGGGCTTTG TCTCAAAAGG GTGGAGAATG GTTGGACCCA CCTTCAGATA TACTGCCACC AAACTCTTTG CCAGTACGTG GTGCGGTTAA TACAAAACTG ACCATTACTT CAACAGATCT TCCTAGTCCG GTTCAAACTT TTGAGCTGGA AATAGAAGGT GACAGCTACA AGGGCATGCC GTTTGTACTC AATGCTGGTG AAAGGTGGAT TAAAAATAAT GGCAGTGACT TTTATGTGGA CTTTGCTAAA GAAGAAAAAC ATGTTCAGAA GGATTATGGC GATGGAAAAG GTACAGCCAA GCATTTACTG GATAAAATCG CAGATTTGGA GAGTGAGGCC CAGAAGTCTT TCATGCATCG ATTCAACATT GCAGCAGATC TTGTGGACGA GGCAAAAAGT GCTGGTCAAC TGGGCTTCGC AGGGATCCTA GTCTGGATGA GGTTTATGGC TACAAGACAG CTTGTGTGGA ATAAAAACTA TAATGTTAAG CCACGGGAGA TAAGCAAAGC GCAGGATAGA CTGACTGACC TTCTCCAGGA CGTTTATGCA ACTTATCCCG AGTACAGAGA ACTTTTGCGG ATGATAATGT CTACTGTAGG TCGAGGCGGT GAAGGAGATG TCGGGCAACG AATCCGTGAC GAAATTCTAG TCATCCAGCG GAAAAATAAC TGCAAGGGTG GAATTATGGA GGAATGGCAT CAGAAGTTGC ATAACAACAC TAGTCCAGAT GATGTTGTCA TCTGTCAGGC ATTGATGGAT TATATCAAAA GTGACTTTGA CATAAGTGTT TACTGGAAGA CCTTGAACGA TAATGGCATA ACCAAAGAGC GACTCTTAAG TTATGATCGT GCCATACATT CTGAACCAAA TTTTAGAGGA GAACAAAAAG ATGGTCTTTT GCGTGATCTT GGACACTACA TGAGGACTTT AAAGGCTGTT CATTCAGGGG CAGACCTTGA GTCGGCTATA CAAAATTGCA TGGGCTACCA AGATGACGGT GAAGGTTTCA TGGTTGGGGT GCAGATAAAT CCTGTATCAG GATTGCCTTC TGGATATCCA GACTTGCTTC GTTTCGTCCT AGAACATGTT GAAGAAAAGA ATGTAGAGCC ACTTCTTGAG GGTTTGCTTG AAGCTCGTCA AGAGCTAAGG CCACTTCTGC TGAAGTCCCA TGACCGCCTC AAGGATCTGT TATTCTTGGA CCTCGCTCTC GATTCTACTG TCAGAACAGC TATTGAAAGA GGATATGAGC AATTGAATGA TGCTGGACCT GAGAAAATCA TGTACTTCAT CAGCCTAGTT CTTGAAAATC TTGCCCTTTC GTCAGATGAC AATGAAGACC TTATATACTG CTTGAAGGGA TGGAAATTTG CCCTCAGCAT GTGCAAGAGC AAAAAAGATC ACTGGGCTCT GTATGCAAAA TCTGTTCTTG ACAGAAGCCG ACTAGCACTG GCAAGCAAAG CTGAGAGGTA CCTTGAAATT CTGCAACCAT CTGCTGAATA TCTTGGATCT TGTCTTGGAG TCGATCAGTC GGCTGTTAGT ATATTTACTG AAGAGATCAT TCGAGCTGGA TCTGCAGCAG CATTGTCTTC ACTTGTTAAC CGACTTGACC CAGTTCTTAG GAAGACTGCT AACTTGGGAA GTTGGCAGGT TATAAGTCCT GTAGAGGTCG TCGGTTATGT CATTGTTGTG GATGAATTGC TCACTGTACA GAATAAAACC TACGACAGAC CTACAATTAT AGTAGCAAAC AGAGTGAGAG GAGAGGAGGA GATCCCTGAT GGTGCAGTTG CGGTACTGAC ACCTGACATG CCGGATGTAC TATCTCATGT TTCTGTTCGA GCAAGAAATG GAAAGATCTG CTTTGCCACA TGTTTTGATT CTGGTATCTT ATCTGACCTC CAAGGAAAGG ATGGAAAACT GTTGAGCCTA GAACCAACCT CTGCAAATGT AGTCTATAAA GAGGTAAACG ATAGTGAGCT TTCGAGTCCA AGTTCAGACA ACTTAGAAGA TGCCCCTCCA AGTATTTCTT TGGTCAAGAA ACAGTTTGCG GGTAGATATG CTATATCATC TGAGGAGTTC ACTAGTGACT TGGTTGGTGC TAAATCAAGA AATATCGGAT ATCTGAAAGG AAAAGTTCCT TCTTGGGTTG GTATCCCAAC TTCAGTTGCG TTGCCATTTG GTGTTTTTGA GAAGGTTATC TCCGAAAAGG CGAATCAGGC GGTGAACGAG AAATTGCTAG TATTGAAGAA AACTCTTGAT GAGGGGGACC AAGGTGCTCT GAAGGAAATC CGTCAGACAC TGTTGGGGCT AGTTGCACCC CCAGAACTGG TTGAAGAACT GAAAAGTACT ATGAAAAGTT CTGACATGCC ATGGCCAGGT GATGAAGGTG ACCAGAGATG GGAGCAAGCT TGGGCAGCCA TTAAAAAAGT CTGGGCTTCG AAATGGAACG AGAGAGCATA CTTCAGCACG AGGAAAGTAA AACTGGATCA TGACTATCTC TGCATGGCTG TTTTGGTCCA AGAAGTCATC AATGCGGATT ACGCATTTGT CATTCACACA ACTAACCCAT CTTCTGGAGA TTCATCAGAG ATTTACGCTG AGGTTGTGAA AGGCCTTGGT GAAACTCTTG TAGGAGCATA TCCCGGTCGG TCTCTGAGTT TCATCTGCAA GAAAAACAAC CTTGATTCGC CTCTGGTGTT GGGTTACCCA AGCAAACCGA TTGGGTTGTT CATAAGACGT TCAATCATCT TCAGATCTGA TTCCAATGGA GAAGATCTTG AAGGTTATGC AGGTGCAGGC CTCTACGACA GTGTCCCAAT GGACGAGGAA GACCAAGTCG TGCTCGATTA CACTACAGAT CCTCTGATCA CTGACGAGAG CTTCCAGAAA AAGATTCTCT CAGACATTGC ACGCGCCGGA GATGCCATTG AGAAACTCTA TGGAACTGCA CAGGACATTG AAGGTGTGAT CAGAGATGGG AAGCTCTATG TCGTCCAGAC ACGGCCGCAA GTGTGATCAA ATTCTCCGAC CACTTC |
| Length | 4236 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 4073065.. 4082008 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G10760.1 |
| Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
| TAIR curator summary | Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. |
| Alias | [GWD][GWD1][SEX1][SOP][SOP1][STARCH EXCESS 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg485074 | alpha-glucan phosphorylase 2 |
| 1.41421 |
Ahg471553 | |
| 2 |
Ahg490829 | phosphoenolpyruvate carboxykinase 1 |
| 3 |
Ahg942557 | isoamylase 3 |
| 3 |
Ahg483146 | disproportionating enzyme 2 |
| 4 |
Ahg899427 | Glucose-1-phosphate adenylyltransferase family protein |
| 5.19615 |
Ahg481003 | Kinesin motor family protein |
| 5.47723 |
Ahg923583 | Heavy metal transport/detoxification superfamily protein |
| 6 |
Ahg485582 | dual specificity protein phosphatase (DsPTP1) family protein |
| 7 |
Ahg470745 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|