Detail



ID : Ahg931690

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931690|scaffold_304147.1
Sequence
TTTTTTGGCT TCACGAAGAG CCGATGCCGG AAATCGATCT TATGAGAGTC GATCAATGTG TTTCCGATGT TAAATTGGAT TCTTCTTCTT CTCCTATTGA ACCTCCTGGA TTCTTCGATG GTGGTGGTTC TGTAGATGTC GATTTGAAGT TAGATGAACA AGATTCCGAT TGTTTGAAGA AGAGAGGTAG ACGTGGCCGT CCACCGAGAA CTTTGTGTAA AGCTTCTTCT CCTCCGATTT CGAGGAAGAG AAGAGAAGAT GAAGATGTTT GTTTTGTGTG CTTTGATGGT GGTAGTCTTG TACTTTGCGA TCGTAGGGGA TGTCCAAAAG CGTATCACCC AGCTTGTGTT AAGCGTACTG AAGCATTCTT CAGATCAAGA TCTAAATGGA ATTGTGGTTG GCATATATGT ACTACTTGTC AAAAGGATTC CTTCTACATG TGTTATACTT GTCCGTATTC AGTTTGTAAG AGATGTGTTA GAAGCTCGGA GTATGTAGTT GTAAGGGAAA ACAAAGGATT CTGTGGAATT TGCATGAAGA CTATAATGCT TATTGAGAAT GCAGCTGAAG CTAACAAAGA AAAGGTTCAG GTCGATTTTG ATGATCAAGG CAGCTGGGAG TATCTGTTTA AGATTTACTG GGTTTCTCTT AAAGAAAAGC TAGGTTTATC GTTAGATGAT CTTACGAAAG CAAGAAATCC ATGGAAATCT TCTTCGTCGA CTGTTTCTAA GCGAAGAACT ACTAGTCGGG TTCATGAAAA GGATGATGGA AATTCTCCTG GGGTTATGAA AGTACGTCGT GCTAAAGTAA GGAAAATGGA AGCTGTTTCT GTTAGTAATT TGGGTCCTTC TATGGATTCA AACAGTTCTT TGGGTGACAG ACTTCCACCA TTGACTAGTG CTGCTACTTG GGCAACAGAT GAGCTCTTGG ACTTTGTTGG GTATATGAAA AACGGTGATA TTTCTGTCTT ATCAAAGTAT GATGTCCAAA CTCTCGTTCT AGAGTATGTG AGACGGAATA ATCTACAAAA CTCTCCTCAG AATTCTGAAA TAATGTGTGA CCCTAAGCTT ATGAGATTGT TTGGAAAGGA GCGAGTGGAC AACTTGGAAA TGTTAAAGCT TCTTGATTCT CACTTCATCG ATCAAGTGAG GTCTCCAGTC ACAGATAACT CAGCCGGAGG AGTCACTGAA ACTATGTCTT TCCAGGTCAA TGCGAGCAAA AGCTGTAATA GGCTTAATAC ATCTGAACAG CATCAAGAAG GAGAGTCGCA GCAATTGAAC GGGCACAGTA TTCAAGTTAG ACCTTCCAGT TCTGATAGCA GAAACCATGC CGTGGTAAAA CCTGACACAT GTGCCACTCT GTCCAATAAG CCAATCGATG GCTTGGATAC GAATATGGTG TGGTTATATG GGGATCCAGA TGGGAAGATT CATGGACCAT TTTCCTTATA TAACCTGCGA CAATGGAATT TGAGCGGGCA TTTCCCTCCG GAGCTGAGAA TATGGAGGTT GGGTGAACAG CAAAACAGCT CCATACTTTT GACCGACGCA TTAAATGGGC AGTTCCATAA AACAGGGTTA TTACAGAATC ATTCGATCCC CAAGCAGGAT GTGACAGCTA CTATAGCTAA CGATCAAAAC AGGCCTGTGG CTGTTCCTAA AATAGAGAGT AGAATACTTG ACTTCAGCCC CAACTCAGTG TGCACTGACC AGAGTGTCAT TTCTAGCAGT AACAGTGTCA TCACAAGGAG CTCGGATGTG AGTAACAAAA GCGGAAACAA TTTTAACCGC ACCATGCCAT TAGATTTTTC TCTTTCTAAT GAAAGGGATA CTGTGGGTTC TGTCTCTCTC TGGAACAAAA GAAAAGTTGA AAGTCCTTTG CTTGTACAAA GCCCAATAAG CTGTTCACTT TCGCTTGCTA CATTACCCAG AAACTCAAAC TGCTCTCTGC CACCACATGA AAGATGGAAG GCTGGTCAAA CAGATCCGGA TGGAAACAAT GCAGCAATGA ATGCTTACAA TCAAAACGGT AGTCTTAACG GCACAGCTGA GAAACAAGTC ACGGCTACAG TCCAGTCTTG CGGACAGAAC TGGAATGCTG CAACTCCAAG CAGTGCTTCG AATATGTGGG ATTCTAACTC GGGTTTGACG TCTTTCCCAG ACAATCAAGA AATAGACTTT TTAGATCTCT TTAGTCCAAC TTTCAAATTC AACTTTGCAT CTACTACCAC GGATTGGCAA CCCATTGTGG CTGGACCTGA CGAATGTGAC GAATCAGTCT CGGATCTTTT GGCAGAAGTG GAAGCCATGG AGTCCCAAAA ACGTCTTCCT TCTCCAACTT CAACATTCCG TGGTCCTGAA GAATTATTGA TCCGGCACTC TATAAACGAT AGCTTCAGTC CCGCTGAAGG ACATAGCCCA GCACTAGATG TAAGCAAAGG TGACTCCATG AGCTCCACAA ACGATCTGCA AATGCATTCA CGATCTAACA ACACCGTGCA TTTTTAGTCG TGGGCTCGGT TCACTTAG 
Length2528
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21231192.. 21234061
Download Sequence
A.thaliana
AGI-codeAT2G18090.1
DescriptionPHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.06226 Ahg921770 squamosa promoter-like 11
10.247 Ahg471074 Cysteine proteinases superfamily protein
13.4164 Ahg490828 LisH/CRA/RING-U-box domains-containing protein
13.4907 Ahg480605 Protein kinase superfamily protein
14.0712 Ahg486507 alpha/beta-Hydrolases superfamily protein
15.4919 Ahg495855 Calmodulin-binding protein
16.9706 Ahg938942 Protein Transporter, Pam16
18.4932 Ahg888770 F-box family protein
18.7617 Ahg485166 BAH domain ;TFIIS helical bundle-like domain
19.2873 Ahg494272 casein kinase II beta chain 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression