Detail



ID : Ahg494272

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494272|fgenesh2_kg.8__88__AT5G47080.1
Sequence
GAACAAGATT CGACAAAAAA GCAAAACCCT AGAGCTCAAG CTAATCGCCG TCGATTTCTC AATCTCTCAC CGGCGATTTT AAGCCGGTGA AAGTTGTACA ATAGCTGTAA GAGAGATATT CATTAGGTAT TTTAGAACCA TGTATAGAGA CAGAGGAACG GTGAATTCGA GACCTGAAGT TGTGGATCGT AAACGGATCA ACGACGCTCT CGAACGACCT TCTCCGTCAA CGTCTCGTCA AGTTAATGGT AAAGGCAAAG GAACGGCGGC GACGGCGAAC TCCGTTTTGA TTGGGAAGCA GCAGTCTCAT GACCATAGAG ATTCTCGTTC TGCTTCTCTC TCGAAGAACA ATAATGTTTC TGATGATGAA TCAGACACGG ATAGTGAAGA ATCGGATGTT AGTGGTTCTG ATGGAGAGGA TACTTCATGG ATATCTTGGT TTTGTAATCT ACGAGGAAAC GAGTTCTTTT GTGAAGTTGA TGATGATTAT ATTCAAGATG ACTTTAACCT GTGTGGACTC AGCAGTCTTG TTCCCTACTA CGAGTACGCT CTTGATTTGA TTTTGGATGT TGAATCTTCT CATGGAGAGA TGTTTACAGA GGAACAGAAT GAATTGATCG AGTCAGCAGC TGAGATGCTT TACGGATTGA TTCACGCTCG TTACATATTG ACTAGCAAAG GATTGGCTGC GATGTTAGAC AAATACAAAA ACTATGACTT TGGAAGATGT CCAAGAGTTT ATTGCTGTGG CCAACCTTGT CTTCCGGTTG GTCAATCGGA CTTACCTCGA TCTAGCACTG TGAAGATATA TTGCCCGAAA TGCGAAGACA TTTATTACCC ACGGTCGAAG TATCAAGGCA ACATTGATGG AGCTTACTTT GGGACAACAT TTCCACATCT GTTCCTGATG ACTTATGGGC ATCTCAAGCC ATCAAAGGCA ACGCAAAACT ATGTTCAAAG AGTTTTTGGG TTCAAATTAC ATAAGCCGTG AAGGAAGTTT AAAGACAACC CAAGAATCAA GATCATGGCG TTGGAATGGA ACTGAGAAAA GAAGAGACGT GTGTGAACAG AAACGGGAAA TAAACGCGCT GTAATCACAC GAATGGTGAA GAGAGCATTC ATACACATTA GAAGAAAGCA AAAGCATGGT TAGGAAAAAA AAAAAAGCGA AAATCTTTTG ATGAGTTTGT TAAAAACTTG AACATGTATT TTTCTACCTT 
Length1220
Protein Sequence
Protein Residue
Map Locationscaffold_8: 522669.. 524475
Download Sequence
A.thaliana
AGI-codeAT5G47080.1
Descriptioncasein kinase II beta chain 1
TAIR curator summaryRegulatory subunit beta of casein kinase II. purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)).
Alias[CKB1][casein kinase II beta chain 1]
Gene coexpression
MR
MR Locus Description
1 Ahg490543 ARM repeat superfamily protein
4.24264 Ahg474468 Plant protein of unknown function (DUF641)
10.247 Ahg941044 Bromodomain transcription factor
12.7279 Ahg487696 GC-rich sequence DNA-binding factor-like protein
14.2478 Ahg930784 RNA polymerase Rpb6
17.6635 Ahg894054
19.2873 Ahg931690 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein
20.7846 Ahg912993
20.7846 Ahg493298 Cysteine proteinases superfamily protein
23.8747 Ahg941230 Alkaline-phosphatase-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression