| Annotation |
|---|
| Description | jgi|Araly1|941503|scaffold_602047.1 |
| Sequence |
TTCTCTCTCA GAACTTGGAT ATGGGTGAAG CCGTAGAGAT CATGTTCGGA AATGGATTCC CAGAGATTCA CAAAGACACA TCACCCATTC AAACCCTCCA CTCCAACCAG CAGGACTGCC ATTGGTATGA AGAAACCATC GATGATGATC TCAAGTGGTC TTTTGCCCTC AACAGTGTTC TCCATCAAGG AACTAGTGAG TACCAAGATA TTGCTCTGTT GGATACCAAA CGTTTTGGAA AGGTGCTTGT GATTGATGGG AAAATGCAAA GTGCAGAGAG AGATGAGTTT ATCTACCATG AATGTTTGAT CCACCCGGCC CTCCTTTTCC ATCCCAACCC CAAGACGGTG TTTATAATGG GAGGAGGTGA AGGCTCTGCT GCTAGAGAAA TACTAAAACA CACGACGATC GAGAAAGTTG TCATGTGTGA TATTGATCAG GAAGTTGTTG ACTTTTGCAG AAGATTTCTG ACCGTTAACA GCGATGCTTT CTGTAACAAA AAGCTTGAAC TTGTGATCAA AGATGCAAAG GCTGAATTGG AGAAAAGAGA AGAGAAGTTT GATATCATAG TAGGAGATTT AGCCGATCCA GTGGAAGGTG GACCTTGTTA TCAGCTCTAC ACGAAATCCT TCTACCAAAA CATCCTCAAA CCCAAGCTTA GCCCCAATGG CATTTTTGTG ACCCAGGCTG GACCAGCAGG AATATTCACT CATAAGGAAG TCTTCACATC AATCTACAAC ACCATGAAGC AAGTGTTCAA GTACGTAAAG GCTTACACAG CACATGTGCC ATCATTTGCG GACACATGGG GATGGGTGAT GGCATCGGAC CACGAGTTTG ATGTTGAAGT TGATGAAATG GATCGAAGAA TCGAAGAGAG AGTTAAAGGA GAATTGATGT ATTTAAACGC TCCTTCTTTC GTCTCTGCTG CTACTCTCAA CAAAACCATC TCTCTCGCAC TGGAGAAGGA GACTGAAGTT TATAGTGAAG AGAACGCGAG ATTCATTCAT GGTCATGGTG TGGCGTACCG GCATATTTAA AAGAAGAACC GGTTCAATTT |
| Length | 1060 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7873316.. 7875340 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G19530.1 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| TAIR curator summary | Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. |
| Alias | [ACL5][ACAULIS 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg931043 | |
| 9.74679 |
Ahg939349 | Protein of unknown function (DUF1645) |
| 14.6969 |
Ahg932026 | like AUXIN RESISTANT 2 |
| 20.9284 |
Ahg941090 | NSP-interacting kinase 1 |
| 21.6333 |
Ahg934183 | Leucine-rich repeat protein kinase family protein |
| 23.2379 |
Ahg472226 | tubulin beta-5 chain |
| 29.1548 |
Ahg482819 | Transmembrane amino acid transporter family protein |
| 30.4302 |
Ahg477902 | Glycoprotein membrane precursor GPI-anchored |
| 32.249 |
Ahg488334 | Gibberellin-regulated family protein |
| 33.1662 |
Ahg483386 | MAP kinase 20 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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