Detail



ID : Ahg932155

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932155|scaffold_400143.1
Sequence
TCTTTAAGTG AAGTGAAGAT ATGGCAAGTG CACTTGGATG GAGATTTTCT TCCACTAATG GAAATGGCCT TGCCCCAAGC GACACGGAGA GAAATGGTGA TATGAAGATG CAAGATTCAG AGCCCCCAAC TCCACATTCA AGCACAAAGA TGAGTTTGAG AGACCGGACA ACCAGCATGG AAGATCCAGA TGGGACATTA GCAAGTGTTG CCCAATGCAT TGAGCAGCTG CGCCAAGGTT CATCATCTGC ACAAGAAAGA GAATATTGCC TGAAGCAGTT ACTGGACCTT ATAGAAATGC GTGAAAATGC ATTCAGCGCT GTCGGATCAC ACTCCCAAGC TGTGCCAGTA CTTGTCTCTC TTCTCCGATC AGGGTCAGTT GGAGTGAAGA TACAAGCTGC AACCGTCTTG GGTTCACTCT GCAAGGAGAA CGAACTTAGA GTTAAGGTGT TACTTGGGGG ATGCATTCCC CCACTGCTTG GTCTTCTCAA GTCCAGTTCA GTCGAAGGGC AGATCGCTGC AGCAAAGACA ATCTATGCTG TTTCTGAAGG CGGGGTGAAA GACCATGTTG GATCAAAAAT ATTTTCCACT GAGGGAGTTG TACCAGTTCT GTGGGACCAA TTGCGTAGTG GAAATAAGAA AGGAGAGGTT GATGGTTTGT TAACTGGTGC ACTTAAGAAC CTTTCTAGTA CCACTGAGGG ATTTTGGTCT GAGACAATTC GAGCTGGGGG AGTGGATGTA CTTGTGAAGC TGCTTACAAG CGGGCAGTCA AGTACACTAT CTAATGTCTG CTTCCTTCTT GCATGTATGA TGATGGAAGA CGCCTCTGTT TGTTCCAGTG TATTGACTGC AGACATTACA AAACAGCTTC TCAAGTTATT AGGATCGGGT AATGAAGCCC CAGTGAGGGC AGAGGCTGCT GCTGCTCTCA AGTCGCTTTC TGCTCAATCT AAGGAAGCAA AGCGAGAAAT CGCTAATTCG AATGGTATTC CTGTTTTAAT AAATGCAACA ATAGCTCCAT CTAAAGAATT TATGCAAGGT GAATATGCGC AAGCATTACA AGAAAATGCA ATGTGTGCCC TTGCTAATAT TTCCGGTGGT TTGTCATATG TCATATCAAG CCTTGGTCAG AGCCTTGAAT CTTGCTCTTC GCCTGCTCAG ACTGCCGACA CCCTTGGGGC TTTAGCTTCA GCATTGATGA TATATGATGG CAAGGCAGAA ACTACAAGAG CATCAGATCC ATTGGTCGTT GAGCAGACTC TGCTGAAGCA GTTTAAGCCT CGTCTACCAT TCCTGGTGCA AGAACGTACA ATTGAAGCAC TTGCAAGTTT GTATGGGAAC TCCATACTCT CTGTCAAACT TTCCAACTCG GATGCAAAAC GTTTGCTTGT TGGTCAAATA ACAATGGCGG TGAATGAGGT TCAAGATGAG CTTGTAAAGG CTCTTCTGAT GCTGTGTAAC CATGAAGGTA GCCTGTGGCA AGCACTACAG GGCCGTGAAG GGATCCAATT GCTAATATCT CTTCTGGGTC TTTCATCCGA ACAGCAGCAA GAATGTGCTG TTGCACTTCT TTGCCTCTTG TCTAACGAAA ATGATGAAAG CAAGTGGGCC ATCACTGCTG CTGGAGGTAT ACCTCCACTT GTTCAAATTC TAGAGACTGG GTCGGCCAAA GCCAGGGAAG ACTCTGCAAC CATCCTTAGG AACTTGTGCA ATCATAGCGA AGATATACGT GCTTGTGTTG AAAGTGCTGA TGCTGTCCCT GCTCTCTTAT GGCTACTGAA GAATGGTAGT CCAAATGGTA AAGAAATTGC CGCCAAGACA TTGAATCATT TGATTCATAA ATCAGATACT GCAACAATCA GTCAGCTTAC TGCTTTGCTG ACCAGTGATC TACCTGAGTC TAAAATTTAC GTTTTGGATG CATTGAAGAG TATGCTTTCT GTGGTCCCAT TCAATGACAT GTTACGTGAA GGCAGTGCTT CGAATGATGC TATTGAGACC ATGATCAAGT TGATGAGCTC TGCTAAAGAA GAAACTCAAG CAAATTCAGC CTCAGCTCTT GCAGCTATCT TCCAGAGCAG AAAGGATTTG CGTGAGAGCG CTCTAGCCCT CAAAACTCTC TTGTCGGCCA TAAAACTGTT AAATGTGGAT TCGGAGAAGA TCCTTGTTGA GTCTTGCCGC TGTGTGGCTG CAATTTTACT TTCGATTAAG GAGAATCGCG ATGTGGCCAT TTCTGCCAGA GAAGCATTGC CTACCATTGT TTCTCTAGCC AACTCTTCCG TTCTAGAAGT TGCTGAGCAA GGAATGTGCG CTTTGGCTAA TCTTATATTG GACAGTGAAG TGTCAGAGAA GGTCATTGTC GAAGATATTA TTTTGTCAGC CACTAGAATC TTACGTGAAG GTACAGTGTC TGGGAAGACT CTTGCTGCTG CGGCAATTGC CCGCCTGCTT AGTCGTCGCC GAATTGATTC TGCATTGACA GATTCTGTGA ACCGTGCTGG AACAGTGCTT GCCTTAGTGT CTCTTCTAGA ATCTGCCGAC GGAAGATCTG ATGCAATATC AGAGGCCCTC GATGCGCTTG CTATATTCTC AAGGTCAGGA GTTAATGGAA ATGTAAAACC AGCTTGGGTT GTTTTGGCTG AATCTCCTAA CAGTATGGCC CCAATAGTCT CATCTATAGT GAGTGTTGCT AATCCTTCAC TACAGGACAA AGCTATTGAA GTATTGTCAA GACTTTGCCG AGATCAGCCT ATGGTTTTGG GAAACATGGT CAACAATGCC AGAGATTGTG TGTCATCTAT AGCTAAAAGG GTGATAAGTA CCAGGGACCC GAAAATAAAA ATTGGTGGAG CTGCTATTAT TATCTGTGCT GCCAAAGTTA ACGACCAGAA GATGATAGAA AATCTGAATG AGACACAATT GTGTGCCAAA TTTGTTCAAG CACTTGTGCG GATTCTAGAT TCATCTCAGA TTTCTGTGCA AGATCAGGAA AAGGATGAGA AAGATAAAAT CTGCATATGC ATTCATCCCA AAGAAAAGGA AGAAGATGAA GAAGAAGAGG CAACAGAAAA TAGGGAGGGT TCCACGGGGG CAACAGTTAT TTCTGGTGAC AATTTAGCCA TCTGGTTGCT CTCGGTTCTT TCTTGTCATG ATGAAAAGAG CAGAGCAGTT ATATTGGAGT CAGAAGGCAT CGAGTTGATT ACTGACAGAA TAGGCAACCG TTTTCTCCAG GCTGATAATG GAGAAGACGC CAACATTTGG GTTTGTGCTT TATTGCTAGC CATACTTTTC CAGGACAGAG AAATCACTCG CGCACATGCA ACAATGAAGG CTGTTCCAGT GCTCTCAAAT CTTGTGAAGT CAGAGGAATA CGCAGACAGA TATTTTGCAG CACAAGCTCT AGCTAGTCTT GTCTGTAACG GTAGTCGGGG AACTCTTCTA TCTGTTGCAA ACTCCGGTGC TGCGGCTGGG TTTATATCAT TGCTTGGTTG TTCTGATGAT GACATAAAAG AACTTCTGCA GCTGTCGCAG GAGTTTGCTT TAGTGCGATA CCCGGACCAG GTTGCCCTTG AAAGGCTTTT CCGTGTTGAA GATATTAGAG TTGGGGCTAC TTCTCGAAAG GCGATTCCCT TACTAGTTGA ACTTCTTAAA CCAATTCCAG ACCGCCCCGG TGCTCCTCTA CTTTCACTTA ATCTTCTAAC TCAGCTTGCT GGAGACTGTC CACAAAATAT GATTGTCATG GTAGAGTCAG GTGCTCTTGA GGGCCTCTCG AAATATCTTT CCCTTGGACC TCAGGACGAG CAAGAGGAAG CTGCAACTGG TCTTTTAGGC ATCTTATTTA GCAGTGCTGA AATTCGAAGG CATGAGTCAG CATTTGGCGC CGTCAGCCAA CTTGTAGCAG TTTTGCGTCT TGGTGGAAGA GGAGCAAGGT ACAGTGCCGC CAAGGCATTG GATAGTCTCT TTACTGCTGA CCATATAAGA AATGCAGAGT CTTCTAGACA AGCTGTTCAG CCATTGGTAG AGATTCTTAA CACTGGTTCA GAGAGGGAGC AGCATGCTGC TATTGCTGCA CTTGTTAGGT TGTTGAGTGA TAATCCATCA CGGGCTCTGG CAGTTGCAGA TGTGGAGATG AATGCAGTGG ATGTTCTCTG CAGGATCCTT TCTTCAAACT ATACGATGGA ACTGAAGGGG GATGCTGCAG AGCTGTGCTA TGTTTTGTTT GCAAATACAA GGATTAGGTC TACAGTTGCT GCAGCGCGTT GTGTTGAGCC ACTTGTCTCT CTTCTTGTGA CTGAGTTCAG CCCTGCTCAG CATTCAGTTG TACGTGCACT GGACAAGCTT GTCGATGATG AACAACTGGC TGAACTAGTT GCAGCTCATG GTGCTGTGGT TCCTCTTGTT GGCCTTCTCT ATGGTAAAAA CTATGTGCTT CATGAGGCTA TATCCAGGGC TTTAGTAAAG TTAGGTAAGG ACAGGCCTTC TTGTAAACTG GAAATGGTGA AAGCTGGAGT TATCGACTGC GTACTTGATA TTCTCCACAA AGCTCCAGAT TTTCTATGTG CTGCGTTTTC AGAACTGCTT CGCATCCTCA CAAATAATGC TACTATTGCC AAGGGACAAT CTGCTGCGAA AGTGGTGGAG CCACTTTTCC ATTTGCTGAC GAGATTGGAG TTTGGAGCTG ATGGACAGCA CAGTGCTCTG CAAGTTCTGG TAAATATCTT AGAACATCCA CAATGCCGTG CTGATTATAC ACTTACACCG CACCAAGTGA TTGAACCGCT CATTCCGCTG CTGGAATCTC CATCCCCAGC AGTACAGCAG TTGGCAGCTG AGCTTCTGTC TCATCTTCTC TACGAGGAAC ATCTGCAGAA AGATCCATTA ACGCAACTTG CGATCGGTCC TTTAATCCAT GTGCTGGGAT CCGGCATACA CCTATTACAG CAGAGAGCTG TGAAAGCTCT TGTTAGCATT GCTCTAACAT GGCCAAATGA AATAGCTAAA GAAGGTGGTG TGAGTGAGCT GTCAAAGGTA ATACTGCAAG CTGATCCATC GCTTTCCAAT GTGTTATGGG AGTCTGCAGC ATCAATTTTG GTTATCATCT TGCAATTTAG CTCCGAATTT TACCTGGAAG TTCCTGTCGC TGTTCTTGTA AGACTGCTTC GCTCTGCATC TGAAAACACT GTGGTTGGTG CACTTAACGC TCTTCTAGTG TTGGAAAGTG ATGATGGAAC CAGTGCAGAG TCCATGGCTG AAAGTGGTGC CATAGAAGCT CTGCTTGATC TTTTAAGGTC TCATCAGTGT GAGGACACAG CAGCGAGACT GCTCGAGGTA CTGCTCAACA ATGTGAAGAT TAGAGATTCA AAAGCCACCA AGACTGCAAT CTTGCCATTG TCTCAGTACC TCTTGGATCC ACAAACTCAA GCCCAGCAGG CACGATTACT AGCAACTTTG GCCCTTGGTG ATCTTTTCCA GAATGAAGCT CTTGCTAGAA GCACTGATGC AGCTTCTGCT TGCCGTGCTT TAGTCAATGT CCTTGAAGAA CAACCCACAG AAGAAATGAA AGTAGTTGCT ATATGTGCTC TGCAAAACCT CGTCATGTAT AGCCGGTCTA ACAAAAGAGC AGTTGCCGAG GCAGGTGGTG TGCAGGTTGT CTTGGATCTG ATCAGTTCCA GTGATCCTGA AACATCTGTT CAGGCTGCAA TGTTTGTAAA ACTACTCTTC TCTAATCACA CTGTTCAAGA GTACGCATCT AGCGAAACCG TCAGAGCAAT AACTGCTGCC ATTGAGAAAG ACCTATGGGC CACTGGAACC GTGAATGATG AATATCTAAA AGCTTTAAAC TCTTTGTTTA ACAACTTCCC GCGTCTAAGA GCCACAGAGC CTGCAACACT AAGTATACCA CATCTAGTTA CATCCCTCAA GACAGGATCG GAAGCAACTC AAGAAGCTGC CTTGGATGCG TTGTTTCTTC TCAGACAAGC TTGGTCAGCC TGTCCTGCCG AAGTTTCCAG GGCCCAATCA GTTGCTGCTG CAGACGCCAT CCCCTTACTT CAGTACCTAA TTCAATCAGG TCCACCGCGG TTCCAGGAGA AAGCTGAATT CCTCTTGCAG TGTTTGCCAG GTACACTGGT GGTCACTATC AAACGTGGTA ACAACATGAA ACAATCCGTT GGTAACCCGA GTGTGTTCTG CAAGATAACA CTCGGCAACA ATCCTCCTAG ACAAACCAAG GTGATATCGA CAGGTCCTAA TCCAGAGTGG GACGAGAGCT TCTCATGGTC ATTTGAGAGC CCTCCCAAAG GTCAAAAACT CCACATTTCA TGCAAGAACA AAAGCAAAAT GGGAAAGAGT TCCTTTGGGA AAGTAACGAT CCAAATCGAT AGGGTGGTGA TGCTGGGAGC AGTAGCAGGT GAATACAGTT TGTTACCAGA AAGCAAAAGT GGCCCCAGAA ACCTTGAGAT CGAATTCCAG TGGTCTAACA AGTAAACCAC CACTTGATTT TTTGTTTTTG TTTGAGAGGT TTCTTAAATC GAAACTTCTG CTTCTTTTTT TGCCAAATTT TTTTAAAATC GTTTGATTTA TAATGCTACT GTATATAGTT TGTATTGTAA TGTAATG 
Length6617
Protein Sequence
Protein Residue
Map Locationscaffold_4: 652866.. 660460
Download Sequence
A.thaliana
AGI-codeAT2G22125.1
Descriptionbinding
TAIR curator summary
Alias[CSI1][POM2][cellulose synthase-interactive protein 1][POM-POM 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg495032 glycosyl hydrolase 9A1
4.89898 Ahg487306 Cellulose synthase family protein
8.48528 Ahg491486 cellulose synthase 1
12.6886 Ahg474447 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3
14.9666 Ahg493067 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
15.1987 Ahg481566 pleiotropic drug resistance 4
15.4919 Ahg928500 Clathrin, heavy chain
16.7332 Ahg918479 SKU5 similar 17
17.1464 Ahg947488 beta-1,3-glucanase_putative
18.9737 Ahg474507 STRUBBELIG-receptor family 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression