| Annotation |
|---|
| Description | jgi|Araly1|495032|fgenesh2_kg.8__848__AT5G49720.1 |
| Sequence |
ACATTTCTTC ACTTCCACAC ACTTCTTTCT CTCTTTTCTT CTCCAGATCT GAATCCCAAA ACTGTGATTC ATTGTTGTTG TTCTCTGCTA CTTCATCGGA GAGCATCATC ATGTACGGAC GAGATCCATG GGGAGGTCCA TTGGAGATCA ACACTGCAGA TTCCGCCACC GACGATGATC GTAGTCGGAA TTTGAACGAT TTAGATCGTG CGGCTCTTTC ACGGCCACTC GATGAGACGC AGCAGAGTTG GTTACTTGGT CCAACGGAGC AGAAGAAGAA GAAGTATGTC GATCTCGGTT GTATTATCGT TAGCCGCCAG ATATTTGTCT GGACTGTTGG TACTCTTGTT GCCGCCGCGT TACTCGCCGG ATTTATCACC TTGATCGTTA AAACTGTGCC GCGACATCAT CCTAAGAGTC CGCCGCCGGA TAATTATACA TTAGCTCTTC ATAAAGCTCT TAAGTTCTTC AATGCTCAGA AATCTGGGAA ATTGCCAAAG CATAATAACG TATCGTGGAG AGGTAATTCT GGGCTTCAAG ATGGGAAAGG TGAAACAGGA AGCTTCTATA AAGATTTGGT GGGAGGTTAT TATGATGCTG GTGATACTAT CAAGTTCAAT TTCCCCATGG CTTATGCTAT GACTATGTTG AGCTGGAGTG TTATTGAGTA TAGTGCTAAA TACGAAGCTG CGGGTGAGCT CACTCATGTT AAGGAGCTTA TCAAATGGGG AACTGATTAC TTTCTCAAGA CTTTCAATAG TACTGCTGAC TCCATTGATG ATCTTGTGTC ACAGGTTGGA TCAGGGAATA CTGAGGATGG AAATACAGAT CCTAATGACC ATTACTGTTG GATGCGGCCT GAGGATATGG ACTATAAAAG GCCTGTGACT ACGTGTAATG GTGGATGTTC GGATCTCGCT GCAGAGATGG CAGCTGCTCT GGCTTCAGCG TCTATTGTAT TCAAGGATAA CAAGGAATAT TCTAAAAAGC TTGTTCATGG TGCTAAGACG GTTTATCAGT TTGGAAGGAC TCGGAGAGGG AGATATAGTG CAGGCACTGC GGAATCTAGC AAGTTTTATA ATTCAAGCAT GTATTGGGAT GAGTTCATTT GGGGTGGTGC TTGGTTGTAC TATGCTACAG GAAATGTAAC CTATCTCAAT CTAATCACCC AACCCACTAT GGCCAAGCAT GCTGGTGCCT TCTGGGGTGG TCCTTACTAT GGTGTATTTA GCTGGGACAA CAAGCTTGCT GGTGCTCAGC TGCTGTTGAG CCGGTTGAGG TTGTTTCTGA GTCCTGGATA TCCATATGAA GAAATTCTAA GGACCTTCCA CAATCAGACT AGCATAGTCA TGTGCTCATA CTTGCCTGTT TTCAACAAAT TTAATAGAAC CAACGGAGGT TTAATAGAGT TGAATCATGG AGCCCCTCAG CCTCTGCAGT ATTCTGTGAA TGCAGCTTTC CTAGCGACAC TATACAGTGA TTATCTGGAT GCTGCTGATA CTCCTGGATG GTACTGTGGA CCTAATTTCT ATTCAACTAG TGTGCTACGT GACTTTGCTA GATCCCAGAT TGATTATGTA CTCGGTAAAA ACCCTCGGAA AATGAGTTAT GTCGTTGGTT TTGGCACAAA ATACCCAAAA CATGTGCATC ACAGAGGAGC TTCGATACCC AAGAACAAAG TCAAATATAA CTGCAAAGGA GGATGGAAAT GGAGAGACAG CAAGAAACCA AACCCAAACA CGATTGAAGG AGCCATGGTT GCTGGTCCTG ACAAGCGCGA CGGGTTCCGT GATGTCCGTA TGAACTACAA CTACACTGAA CCGACTCTTG CAGGCAATGC TGGTCTAGTC GCAGCTCTCG TGGCATTGTC GGGTGAAGCA GAAGCCACCG GTAAGATAGA CAAAAACACT ATTTTCTCAG CTGTTCCTCC ATTGTTCCCT ACTCCACCGC CTCCACCAGC ACCATGGAAA CCTTGAGAAA GCTAGACTTG TGTGATTCTG TCGCCGCTGC CAGAAAAGAA TGAATGAGGT AAGGATTTTG GGTGTGAGAC CAGAAGATTA GAAGCTAAAC ACAAGTCAGC CATAACCAAC TACTAAGGAT TTCATTTGGC TTTACTAGAT ACAAACCCGG GGTGGGTTGC TTTACCACAA GCATTGTCTT TCTTTTCTTT TTTGGGGTTG CTCTTTTGTT CTTGTGAGAT ATCATATATA TCTATGCGTT TTACTCTGTA TATGTTTGAT ACCAAACTTG TATTCTTTGA AAAACAATTT AATGAACTGT CTTAAACTCT TAACTATGGG GGTATTGTGC AAGTGTGAGA TCAACTTGGA ATAAAAACTG TAGTCTA |
| Length | 2347 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 12697247.. 12700137 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G49720.1 |
| Description | glycosyl hydrolase 9A1 |
| TAIR curator summary | Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1. |
| Alias | [ATGH9A1][DEC][GH9A1][IRX2][KOR][KOR1][RSW2][TSD1][glycosyl hydrolase 9A1][DEFECTIVE CYTOKINESIS][IRREGULAR XYLEM 2][KORRIGAN][KORRIGAN 1][RADIALLY SWOLLEN 2][TUMOROUS SHOOT DEVELOPMENT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg491486 | cellulose synthase 1 |
| 2.44949 |
Ahg487306 | Cellulose synthase family protein |
| 3.16228 |
Ahg932155 | binding |
| 14.1421 |
Ahg930439 | UDP-D-glucuronate 4-epimerase 6 |
| 17.6635 |
Ahg495409 | pectin methylesterase PCR fragment F |
| 18.7617 |
Ahg470596 | Chitinase family protein |
| 34.4674 |
Ahg487481 | Plant protein of unknown function (DUF828) |
| 41.6413 |
Ahg943629 | |
| 45.0777 |
Ahg479351 | Eukaryotic aspartyl protease family protein |
| 46.5833 |
Ahg915184 | photosystem I subunit l |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|