| Annotation |
|---|
| Description | jgi|Araly1|928500|scaffold_300957.1 |
| Sequence |
GCCGCGATCT GAGGTCAAAC ATGGCTGCTG CCAACGCCCC CATCACGATG AAGGAGGTCC TGACGCTTCC GAGCGTCGGG ATCAATCAGC AATTCATCAC GTTTACAAAT GTTACTATGG AGTCTGACAA GTACATCTGT GTACGAGAGA CGTCACCGCA AAACAGTGTT GTAATTATAG ATATGAATAT GCCGATGCAG CCTCTAAGGA GACCTATTAC TGCAGATTCT GCTCTTATGA ACCCAAACTC GAGGATCCTT GCCTTAAAAG CTCAAGTTCC AGGAACTACT CAAGATCATC TACAGATATT TAACATTGAA GCAAAAGCAA AGTTGAAATC TCATCAGATG CCTGAGCAGG TTGTCTTTTG GAAGTGGATT ACACCAAAGA TGTTGGGGCT GGTCACACAG AATTCCGTCT ATCATTGGTC AATTGAAGGC GATTCTGAGC CAGTTAAGAT GTTTGATAGA ACAGCCAATT TGACCAACAA TCAAATTATA AACTATAAGT GCTCTCCTAA TGAGAAGTGG TTGGTTTTAA TTGGAATTGC TCCTGGCTCC CCTGAGAGAC AACAATTGGT TAAAGGAAAT ATGCAGCTTT TCTCTGTGGA TCAACAGCGG AGTCAGGCCC TTGAGGCACA TGCTGCATCG TTTGCGCAGT TTAAGGTCCC TGGGAATGAG AATCCTTCTA TTCTTATATC ATTTGCAAGC AAGAGCTTTA ATGCTGGGCA GATAACATCA AAGTTGCATG TCATTGAGCT TGGTGCCCAA CCTGGAAAAC CATCATTTAC AAAAAAGCAA GCAGATCTCT TTTTCCCACC TGATTTTGCT GATGATTTTC CTGTTGCCAT GCAGGTCTCT CACAAATTTA ACTTGATATA TGTTATCACC AAACTTGGCC TGTTGTTTGT GTACGATCTA GAGACTGCTT CTGCTATCTA CAGAAATCGG ATTAGTCCAG ACCCAATTTT CTTGACTTCT GAAGCTTCCT CAGTTGGGGG TTTCTATGCC ATTAATAGGC GAGGACAAGT TCTTTTGGCT ACAGTAAACG AGGCTACCAT TATACCTTTT ATTAGTGGCC AATTGAACAA TTTGGAGCTT GCTGTCAATC TTGCTAAAAG AGGAAACCTC CCAGGTGCAG AAAATCTGGT TGTCCAGCGG TTCCAGGAGT TGTTCGCTCA AACAAAGTAC AAGGAGGCTG CTGAGCTTGC TGCTGAATCT CCTCAAGGAA TTCTAAGGAC ACCTGATACA GTGGCCAAAT TCCAGAGTGT TCCTGTACAA GCTGGGCAAA CTCCTCCATT GTTACAGTAT TTTGGGACTC TTTTGACTAG AGGGAAGCTC AATTCATATG AGTCACTGGA ACTATCTCGG CTGGTTGTGA ACCAAAACAA GAAGAACCTC CTGGAAAACT GGTTGGCAGA GGATAAGCTA GAATGCAGTG AAGAACTTGG AGACCTTGTC AAGACTGTGG ATAATGATCT TGCTCTGAAA ATATACATCA AAGCACGGGC GACTCCAAAA GTTGTAGCAG CTTTTGCAGA AAGAAGGGAG TTTGACAAAA TATTGATTTA CTCAAAGCAG GTTGGGTACA CACCTGATTA CCTGTTTCTT CTGCAAACCA TACTCCGTAC AGATCCTCAG GGAGCAGTAA ATTTTGCATT AATGATGTCT CAAATGGAAG GAGGTTCTCC AGTTGACTAC AACACCATCA CTGATCTTTT TCTTCAGAGA AATCTGATTC GTGAAGCGAC TTCTTTCCTT CTGGATGTGC TAAAGCCAAA TTTACCTGAG CATGCTTTTC TGCAAACTAA GGTTCTGGAG ATCAATTTGG TAACTTTTCC TAATGTGGCT GATGCGGTAT TAGCAAATGG GATGTTCACC CACTATGACC GGCCTCGCAT TGCTCAACTT TGTGAAAAGG CTGGACTTTA TATCCAATCC TTGAAGCATT ACTCAGAGTT GCCTGATATA AAACGTGTGA TTGTAAACAC ACATGCTATC GAGCCACAGG CTCTTGTTGA GTTTTTTGGC ACTCTTTCTA GCGAGTGGGC TATGGAGTGC ATGAAGGATC TGTTGCTGGT CAACCTGAGA GGCAATCTGC AGATAATTGT TCAGGCTTGC AAGGAGTACT GTGAGCAACT TGGTGTTGAT GCATGTATTA AGCTCTTTGA GCAGTTCAAG TCATACGAAG GGCTATACTT TTTCCTAGGT TCATATTTGA GTATGAGTGA GGATCCTGAG ATTCACTTCA AATACATTGA AGCAGCTGCC AAGACTGGTC AAATAAAGGA GGTTGAGCGT GTAACTAGAG AGTCTAACTT CTATGATGCT GAAAAGACGA AGAACTTTTT GATGGAAGCT AAGCTGCCTG ATGCACGACC TTTGATAAAT GTCTGCGATC GTTTTGGCTT TGTGCCTGAT CTTACTCATT ACCTCTACAC AAACAACATG CTTCGTTACA TTGAAGGTTA CGTACAGAAG GTGAACCCTG GGAATGCTCC CTTAGTTGTC GGGCAGTTGC TTGATGATGA ATGCCCCGAA GATTTTATAA AAGGCCTCAT TCTGTCTGTT CGTTCATTGC TTCCTGTTGA ACCACTTGTC GAGGAATGTG AGAAGAGAAA TCGACTCCGT CTCCTCACTC AGTTCTTGGA GCATTTAGTT AGTGAGGGAA GCCAGGATGT GCATGTCCAT AATGCCTTGG GTAAAATTAT CATAGACAGT AACAACAACC CTGAGCATTT CCTGACCACC AACCCTTACT ACGACTCTAA GGTTGTGGGT AAGTACTGCG AGAAACGTGA TCCTACCCTG GCGGTTGTGG CATACAGAAG AGGACAATGT GATGAGGAAC TCATCAATGT CACTAACAAA AACTCTTTGT TCAAGTTACA AGCCAGGTAT GTAGTGGAGA GGATGGATGG TGATCTGTGG GATAAGGTTC TCGATGAAAA CAATGATTAT AGAAGACAGC TTATTGACCA AGTTGTTTCT ACTGCTTTAC CTGAAAGCAA GAGCCCGGAG CAAGTTTCTG CAGCTGTTAA AGCATTCATG ACTGCTGATT TGCCGCACGA GCTTATTGAG CTTCTTGAAA AGATTGTTCT TCAAAATTCT GCTTTCAGTG GAAACTTCAA TCTGCAAAAT CTGCTTATAT TGACAGCTAT TAAGGCAGAT CCATCTAGAG TTATGGATTA CATTAACAGG CTGGACAACT TTGATGGACC TGCGGTTGGA GAAGTCGCAG TTGAAGCCCA ATTGTATGAG GAAGCATTTG CTATCTTCAA GAAGTTCAAC TTAAATGTTC AGGCTGTCAA TGTATTGCTG GATAACGTCA GAAGCATTGA GCGTGCAGTT GAGTTTGCAT TCCGGGTCGA AGAAGATTCT GTTTGGAGCC AAGTTGCTAA GGCGCAACTC AGAGAAGGAT TAGTCAGTGA TGCAATTGAG TCCTTTATCC GTGCTGATGA TGCCACTCAT TTCTTGGAAG TCATACGTGT CTCTGAAGAT ACTGATGTCT ATGATGACTT GGTCAAATAC CTTCTGATGG TTAGACAGAA GGTGAAGGAA CCCAAGGTTG ATAGTGAGCT CATCTATGCA TATGCAAAGA TTGATAGGTT AGGTGAGATT GAAGAATTCA TTCTGATGCC AAACGTTGCT AATCTACAAA ATGTTGGTGA TCGTCTGTAT GACGAAGCTC TGTATGAGGC TGCAAAAATA ATCTATGCGT TCATATCAAA CTGGGGCAAG TTAGCCGTCA CACTTGTGAA GTTGCAACAG TTCCAAGGTG CTGTTGATGC TGCAAGGAAA GCAAACAGTG CAAAGACATG GAAGGAAGTC TGCTTTGCTT GCGTTGATGC AGAGGAATTC CGGTTGGCTC AAATATGTGG TCTTAACATT ATCATTCAGG TGGATGACCT GGAAGAAGTC AGCGAGTACT ACCAGAACAG AGGGTGCTTC AATGAATTAA TCTCACTTAT GGAGAGTGGA CTTGGGCTTG AACGTGCTCA CATGGGTATC TTCACCGAGT TGGGTGTACT GTATGCTAGA TATCGTTATG AGAAACTTAT GGAACACATC AAGTTATTTT CAACTCGCCT CAATATTCCC AAGCTTATAC GGGCCTGTGA TGAACAACAG CACTGGCAGG AACTTACTTA TCTGTACATT CAATATGATG AGTTTGATAA TGCTGCGACC ACCGTCATGA ACCATTCTCC TGAAGCATGG GAGCACATGC AATTCAAAGA CATTGTTGCC AAGGTAGCGA ATGTTGAACT GTACTACAAG GCTGTGCACT TCTACTTGCA AGAGCATCCT GATCTAATCA ATGATCTTCT CAACGTGCTT GCGTTGCGGT TAGACCATAC TCGTGTTGTT GATATAATGC GAAAGGCTGG TCACTTGCGT CTTATCAAGC CATACATGAT TGCAGTTCAG AGCAACAATG TCTCTGCTGT TAATGAGGCT CTGAATGAGA TATACGTGGA AGAAGAAGAC TATGATAGGT TGCGAGAGTC TATTGATTTA CATGACAGCT TTGACCAGAT TGGCCTCGCT CAGAAGATCG AGAAACACGA GCTTGTTGAA ATGAGACGTG TGGCTGCTTA TATCTACAAG AAAGCGGGCA GATGGAAGCA ATCAATTGCA TTATCAAAGA AAGACAACAT GTACAAGGAC TGTATGGAAA CTGCTTCACA ATCCGGTGAA CATGAACTTG CAGAACAACT ACTGGTGTAC TTCATTGAAC AGGGCAAAAA GGAATGCTTT GCTACGTGTC TATTTGTATG TTATGACTTA ATCCGACCAG ACGTGGCTCT TGAACTTGCG TGGATCAACA ATATGATGGA CTTTGCCTTC CCGTATCTCC TCCAGTTTAT CCGAGAATAC TCTGGCAAAG TGGATGAGTT AATAAAGGAC AAGCTGGAGG CACAAAAAGA GGTGAAGGCT AAAGAGCAGG AAGAGAAGGA TGTTATGTCC CAACAGAACA TGTACGCCCA ACTATTGCCA CTTGCTTTAC CTGCACCACC GATGCCAGGA ATGGGAGGTG GTGGTGGGTA TGGTCCGCCA CCACAAATGG GCGGTATGCC AGGAATGCCT CCCATGCCAC CATATGGAAT GCCACCGATG GGTGGCTACT AATATCCGCA TTGGAAAATT AT |
| Length | 5152 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3176153.. 3184480 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G08530.1 |
| Description | Clathrin, heavy chain |
| TAIR curator summary | |
| Alias | [AtCHC2][CHC2][clathrin heavy chain 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg478454 | Clathrin, heavy chain |
| 2 |
Ahg935928 | Endomembrane protein 70 protein family |
| 2.44949 |
Ahg488411 | ARM repeat superfamily protein |
| 3.4641 |
Ahg472400 | Calcium-binding EF hand family protein |
| 4.24264 |
Ahg487009 | proteolysis 6 |
| 4.58258 |
Ahg943318 | damaged DNA binding protein 1A |
| 4.89898 |
Ahg940557 | Endomembrane protein 70 protein family |
| 4.89898 |
Ahg485166 | BAH domain ;TFIIS helical bundle-like domain |
| 5.2915 |
Ahg490214 | glucan synthase-like 5 |
| 7.48331 |
Ahg939446 | transducin family protein / WD-40 repeat family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|