Detail



ID : Ahg932812

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932812|scaffold_400800.1
Sequence
GTGAATCGTC TCTGTCCGAT ATGACTCAGA CAGTTCATTT TTCCTCTGGA AACCCTAGAA TCGGCGAGAC TCGCGGCGTC ATGCATCTAT TTTCCGACGA CGTCGTTTCT TCTTCCTCCT CCTCCTCGAA TCTCCCTATT GGAAGGAACC CTCTCGTTTG CGTTCTTGGG GTGCCCAACC ACATGACTTA TGCAGATTTT TGCCAGTTCT GCGGCTCCTT CATTCACCAC ATACTCGAGA TGCGAACCGT CAGGAATGAT GACATTGAAA ATAGATACAG CATTTTGATT AGGTTTGATA GTCAGGAATC TACCGATACA TTCTTCCACC ATTTTAGAGG GAAACAGTTC AACTCTCTCG AGGAAGATCT CTGTCGCCTG CTTTTTACTC TTGATGTTCA GTTTACCGGT TATAGTGGAT CCATTGACCA TACACAGCCT TCTGCTGCTG GCCCAATAGA GCAACCTACT TGCCCAGTGT GTCTTGAGAG ATTGGACCAA GACACAGGTG GCATTCTCAC AACCATGTGC AATCATTCTT TTCATTGTTC ATGTATTTCT AATTGGCCAG ATTCTTCTTG CCCAGTTTGT CGATATTGCC AACAGCAACC TGAAAATTCA GTATGTTGTG TTTGCCAAAC AACGGAGAAT CTCTGGATGT GTGTTATCTG TGGGGTTGTT GGCTGCGGAA GGTACAAGGA AGGACATGCC AGAAGACACT GGGAGGAGAC AGAGCATTGC TATTCACTTG AGCTTGAAAC ACAACGTGTT TGGGATTATG CTGGTGACAA TTATGTTCAC CGGCTTATTC AATCCAAAAC TGATGGCAAG CTAGTGGAGT TGAATTCTCA TGGAAGTCTG AGCAAGGATG GTTGTGGAAG CTGTGAATAT TCTGACAGTG GAATGACTGA TGCTCTCCTG AACAGCAAAG TGGACATGAT CATTAGTGAG TACAACGAAC TTCTCCAGGC ACAACTAGAG AATCAAAAAC AATATTTTGA AAAGTTGCTA CAAAATGTCA AAGAGGAAAC GGAACAGAAA GTCTCAGAAG CTGCGAGCAA GGCGATAAGC CAGAGACTGC AGAAGCTGCA AACCAGGTTT GACAGATGTG TCAAAGAGAA GCAATTTCTT GAAGATTTGA ACGAAAATCT TGTGAAAAAT AAGGACGTAT GGAGCACCAA GATTACAGAA ATGGAAGAAA GGGAGAAGAA GGCAGTTCGG GCAAAAGATG AAAAGATTCA GGGCTTAGAA GAACAGCTTG GAAAACTAAT GGCCCAAATG GATGGTGAGA GTGAAGTCTC GGAGACGAAA GAGGTCCAGG ACGCCACTGT CTTGCCCTTG TCGACCACCA ATACCTCTTC TTCTGGGTCA GGGAATGTTA TACATGCAAA TAAAAAGAAG AGTAACAGAA GAAAGAGTTA GATCAAGATT CAAACTCCAA TT 
Length1442
Protein Sequence
Protein Residue
Map Locationscaffold_4: 5218220.. 5220782
Download Sequence
A.thaliana
AGI-codeAT2G26000.2
Descriptionzinc finger (C3HC4-type RING finger) family protein
TAIR curator summary
Alias[BRIZ2][BRAP2 RING ZnF UBP domain-containing protein 2]
Gene coexpression
MR
MR Locus Description
18.8149 Ahg313345 ureide permease 5
20.5913 Ahg933547 high-level expression of sugar-inducible gene 2
23.1517 Ahg494587 Calcium-binding EF-hand family protein
23.6854 Ahg354720 Transcription factor TFIIE, alpha subunit
25.7876 Ahg493617 DENN (AEX-3) domain-containing protein
32.0312 Ahg494475 Disease resistance protein (TIR-NBS-LRR class) family
32.619 Ahg471852 molybdenum cofactor sulfurase (LOS5) (ABA3)
33.6303 Ahg934176
46.0217 Ahg920054 Flavin-binding monooxygenase family protein
48.5695 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression