Detail



ID : Ahg932954

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932954|scaffold_400942.1
Sequence
ATTCCTCCTT CAGCTGAACA ATGGTTCGCT CCAAAGCTCC TGCGAAGAAG CAGCAAATTG ATTTCAAGAA AATCAAGAGA AAGCTGGGGA GAAAATTACC TCCACCAAAA AATGCAACTA ACACAGAGAT TAAATCCAAA GAAATTATAA TTCCTGAGCA AAGTGTGGCA GCAGAAAAGA CTGGCTTTGC TACAAGTAAT AAAAACTTGA CCTTGGAGGA GCTTCTAGTA CGAAGTCGTC ATCCCAATGC TAAAGTTCGC AAAAATGCGT TACTTGGTAT CCAAGACCTT TTAAAAAGTC ATCCAGTAGA GCTGCAGTCA AAGAAATATA CTATCATACA ATGTCTTAAG GGACGCATTA ATGATGATGA TAAGCAAGTG AGAAAAGCTT TTTATGAACT ATTTGACACT CAGATCTTTC GTTTTTGTAA ACAAGAGGAT ATCAAGGGAC TTATGGTGTC ACCTTTGATG CTATCCATAT TTCACGCTAT GGCTAATTCA TTGATTGATG TTCGTTTGGA TGCTTTCGCT TTTTTACACC TTGTTGTGGA CTACTACCCG CCTTCATTTT CCATGTATCC TGAAGAGATT CTTGAAAACT ACAAGGATAT CATTATTCAG AGCAACCATT TTTATGTGCA AGATAAAACC AATCTAAAGG TAGCTCTTTC CGGGTTGTCA CATTGCCTCT CGCTGTTGCC ATGTGATGAG ATCCACACCA AATCACAGAA AAAGCATTTC CAACAAAATG AAACCCTACT CGCCTATGAG CAAGATGCTG CAAAAGAAGG TTTTGCCCAC GTCTCTGTGA GATTGAAGGA GATTGTTGGA GCCTTAATCA ATTGTTTCCA AGATTTCATT CCACTGCTTC GTGCTCCACG AGGATTGGAT CCACAATCAT TAATTGATTG CGTGCACCAT ATCCTCTGCA GCATATGTTA TGCCATCAAG TTTTCGCACA CTCAGACACA TACTGCAACT GAAGAAGAAG AAGTTACTCT GATGAAACTG GATCACCACA TTTCATCAAT GTTATCAAAA AAGTTACTTG CTTCTTTTCC CCTTATTCCC AAAATCTGCG TTTCTAAAAG GAATGATGAA AGCTACTTTA TCCTCAACGG TGTATTGACA GAAATCTTTT TGGAAGTAAG TGAATGGAGC CACCTTCCTT GTGACCTTTC CTATAGATTT CTGGAATTTA TTGAGAATAC CCTACTAGGC AAGATCATCA GGAGCATTAG TCCACCTATT CACGAAAAAG CTTTGCTTGC ACTCGTGCCT TTTGTTCCAA AACTTACTTT GAGGGTGGAC CGTGATTGGA GAGATAAACT GATGCAGGCG TTCACTATTA CTTTAAGCGA TTGCAAACCA GAGTCTCCAC TTCAATTAGC CTGCATTTCA ATTGTTAGAG AACTGATTAT CCCTAATGGA AATATCCTTT ATCCCAATGA TCCAACCGTA GATAACTACC AGCGTGCTTG GGTCAACAAA CTTCCGTCAC TGCTTCATCA GTTGGGTGAT AAGCATCCCG TTTCTACCCA GGTTGTTTTG CAACTTTTGC TTGACCTTGG GCGAGTTGGG TTTCTGAAGA ATACTTCCCC TGCATTTGAA GAAGGCGTCA GAAACTTCTT CAACCCTTAT CAGGGAGAAG GTGATGTGCC TGGTGGACCA TTTGCAAGTC TCCCTAGGGA AGCCCAAGAA CTTGCTCTCT CTTTCCTTTA CTACTTCACC ATAGACCATT TCAGCTCCCC TATGCTGAGA GCAATAGTTT CATGCTGTTT ATATGAACAA CTTAAACCAG CTGTGTTGTA TCGGATAGTG GAAATTCTTC ACACTGCGTA TAGAGATGGA TATATTCAGA TTACAGATCA TTTTAGCTTC TTCATCACTC TAATTGCGCG TTTCAAAGTT GTCCCTCCAG AGATGGGGAT TGAGTGTGAT GAGCGGCGGG AGACAACATT CAAAGCACTT ACAAACCTTG TGTGCTCATG TTTGTCAGGA ATGGGTGATA GCTCTCTTGT CCTCCAGATT CTAGAGAAAG CTTTTGTCGA ACAAATAGGC AAATACTTTA TTTTGAAGCC TGCTTTGGAC AATGGGTGTG GCATACTCAG GATGATCTGC ACGTTGGACT CTAAACCCAC CAGACTTTCT GAAAGCAGTG TAACCACTCT AAGTGAATTC TTGCCGGGGT ATTTGATGGA TATAGTCAAT TGTATACCAG AAGATAAGGA GAAGTCTTCT TACCTTTACA TACAAACATG TCTCTACTAT TTAGTACCTT GCTTTTTGCT GTTTGACCGG AGCTCCAAAC TCACAGAAGA GGTTCTGAAA AGATTGCGAT TGATGGTTAG TGAAAACACT AAAGCGATGC TGGAATCACC GGTCTGGGAG AGCAGTCGAA ACTTGTTGAA TTTGATACAA TGCATTGTCT CTGTGATCCT GCTGATGCAC AACGACGTCA GAGTTAGGAA GATAATATCA TCATTCAAGT CAGAGATCGA TTTGATTCTG CACAGCGTTG TCACGTTGCA GTCCTCGAGC ATGACAGTAG AAGGAAAGCA TATGATGAAG ATTGCAGGAG AGCGACTTAG GATTGCATCC AATAGCTTAG TAAGTTGTAC AACTGTGACA ATAGAATGAT TTGTGCTCTC AGGCTTTTC 
Length2659
Protein Sequence
Protein Residue
Map Locationscaffold_4: 9436578.. 9440649
Download Sequence
A.thaliana
AGI-codeAT5G06350.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.09902 Ahg328571 SDA1 family protein
5.2915 Ahg482339 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial
10.8167 Ahg494216
22.8035 Ahg486467 methionine aminopeptidase 2B
30.1662 Ahg473197 glycyl-tRNA synthetase / glycine--tRNA ligase
30.3315 Ahg491484 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
30.5123 Ahg487803 actin 7
34.2929 Ahg496574 Regulator of chromosome condensation (RCC1) family protein
37.2693 Ahg312583 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
38.3927 Ahg473611 aspartate kinase-homoserine dehydrogenase i
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression