Detail



ID : Ahg933318

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933318|scaffold_401306.1
Sequence
GGCCGCCGCG AAGCTAACCT CCAAAAATGG CGAAAGGAGA CGATAATGTG CAGAGGAAGA AGAATAAATT GACGAGGAAG AAGATGAGTA GGAAGAACGA TACCGCCACC GTCTCTGCTC GTATCTCCGC CATTATCGCC GCCAAGAAAC GTCGCAAGTC TGGTAAACGC AGCATGTGTC AGGGAATGTG TTTTACTCTT CCTACACTTG AAGATCCATT CAATGAAAGG CAAGGTAAAG CTGATATTAC TAAAAAGAAA AAGAAAAAGA AAAAGGTCAA GAGTAGAGAA GAGAAGAAAC CATCTACTAT GTCCATTGAC GGTGTTGAGA AGAAGATGGA TGGTCCACCA AAGTTTCTCA TGTTGAACTT GAATGAGATT GAGAGCTCGT TTCGTAAAGA TAGTACATAT AGTGAACAGC ATGATAAGTC TTTGTTCACT AGCACTTGGG GGATTGAGTT CTGGAAATGT TTTTCATCTG GGAAAGATAT TTTGGAGACA AGTGGAATGT CTTCTACTGT GGAACAGATT GCTTGGATTG TTTCAAGTGC AGCTGATGCT ATTGCTAGAC GGGAGAAAGA CGAGGAGGAA GAGGAGGAGG AGGAGGAGGA GGTTGGAAAC AGTCCTTTTC TTTTGTACCT TGTGCCATCT CAGTCCAAAG CTTCTCAGGT CCGATCCGTT TGCAAGGCAC TGAAAGGTAT TGGAATTCAC ACAGTGAGCT TACACCAAGG CGCGCCACTA GATCATCAGA TTTCAGGATT GAAAAGCGTT GAGCCTGAAT TTATAGTTGC TACACCTGAT AGACTTTTGG AGATTGTTAC CTTGAAGGGC GTTGATATAT CAAGCGTTTC ATTGCTGGTA ATTGATGAAC TAGGTTCACT TTGCACTGGT GGTTATCTAG ATGCTGTTAA ATCCATTAAG CAGGCCATTT CCAGCAAACA CCAATCGATA GTTTTCAACG ACAGTTTTAG TGATTCCACT ATTCCAGCCG TCCAGAGTCT TTTGGGGGGA TCAGTTAACA GAGTTACCGT CAGTGATTCT GTTGCCAGCC AAGGCTCTTG TATTACCCAG ACTGTTAGTG TCTGCGCCTC GGAGGAAAAA AAGCTGCAGA AGTTTGCAGA GCATCTGGGT TCATCTTCGT CGAAGATAAT ATACATTGTT ACGAAGGAAG AAAGTTTCAA AAAGATAAAG GCTCTGCTTA AGCTCAAGGG TCTATCTGTC TCAATCAATA GTGACTCTAA AATCTCAGAG GTCAAAAAGA GCCGGAAACC TGTGGCACAC TTGATTGACA TAGAACAGTT GGATACTACA GTTATGAGGG ACTTCGAAAC CGTTCTACTT CCAGACTTTT TCCCATCAAT CGAAATTTAT ACTCAGATTC TAACGAGTAT GGCTAGAGAG AGTGTTCACG GCGTACTTCA CAGCTTTATA ACAGAAAAGG AGGCTGCTTC TTATCGAGCT GGACCATTAG TGACTATCCT GGAGAATTGT GGTCAGAACG TGCCTGACCC TTGGAGGAAT ATGTATGTCG CTATGTCTGA TTAATCAAAT GTTGTCTCCA ATTCTCT 
Length1567
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12226736.. 12230214
Download Sequence
A.thaliana
AGI-codeAT2G28600.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12 Ahg942536 Transducin family protein / WD-40 repeat family protein
14.2127 Ahg479235 transcription regulatory protein SNF5, putative (BSH)
17.6068 Ahg935298 Small nuclear ribonucleoprotein family protein
17.8326 Ahg480727 Noc2p family
21.095 Ahg485949 ribosomal protein L23AB
22.0227 Ahg474417 Ribosomal RNA processing Brix domain protein
22.8473 Ahg928085 NOP56-like pre RNA processing ribonucleoprotein
26.7395 Ahg471469 ARM repeat superfamily protein
31.3209 Ahg320951 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
33.2716 Ahg488911 Uncharacterised protein family (UPF0041)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression