Detail



ID : Ahg479235

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479235|fgenesh2_kg.3__1936__AT3G17590.1
Sequence
CACTCTCTCT CGCTGACTCT GTTCAAAGCC AAATTGTGAA ATTGGGGTTT AAGGATGAAG GGTTTAGTGT CTACTGGTTG GAAAGGTCCC GTCAAGTTTA GGATGCCCAC TGCTGAAAAC TTGGTACCAA TTCGTTTGGA CATTCAATTC GAGGGTCAGC GTTACAAAGA TGCTTTCACT TGGAACCCTT CAGACCCGGA TAATGAAGTC GTTGTCTTTG CCAAAAGAAC TGTTAAAGAC TTGAAACTGC CCTCTGCATT TATCACTCAG ATTGCCCAAT CTATTCAGTC TCAGCTCTCA GACTTTCGGG CATATGAAGG ACAAGATATG TACACTGGTG AAAAAATCAT ACCAATTAAG CTTGATCTCC GAGTTAACCA TACCCTCATC AAGGATCAGT TCTTGTGGGA CCTAAACAAT TTTGAGAGTG ATCCTGAGGA ATTCGCAAGA ACCTTGTGCA AGGATTTAGG TGTTGAAGAT CCTGAAGTTG GACCTGCTGT TGCCTTTGCA ATAAGGGAAC AACTTTACGA GATTGCAATT CAAAGTGTGG CTTCAGCTAG GGAGAGTAGA TTAAGTAAGA AAGGCCGCAG AGGATCTGAT CATGGTTCAG CGAGCAAGGC AAGTGGCTTG TCAATGGACT TAATGAAGTT ATTCAGCTTT AAGTCCAGTG TAGTTCGGAA AAGGAAAGAC TTGGATGTTT ATGAACCAGT TGTGGATCTG CTAACAAGTG AGGAAGTTGA TGCGCTTGAA GCGAGGGCAG AGAGGCATGC AAGGTAAAGA GTTTCGTTTA CATGTATATT TATTTCTTAG GGCAGGACAC TCAAAATATG TTGTATCATG CTTCTTAACT AAAGTTTATG ATATTAAGAC AATCTTTAAT GAGAC 
Length885
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7071159.. 7073617
Download Sequence
A.thaliana
AGI-codeAT3G17590.2
Descriptiontranscription regulatory protein SNF5, putative (BSH)
TAIR curator summaryEncodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.
Alias[BSH][CHE1][BUSHY GROWTH]
Gene coexpression
MR
MR Locus Description
6 Ahg903697 mitogen-activated protein kinase kinase kinase 6
12.4499 Ahg351421 Beta-galactosidase related protein
14.2127 Ahg933318 P-loop containing nucleoside triphosphate hydrolases superfamily protein
15.2971 Ahg482793 Protein of unknown function (DUF3411)
25.8457 Ahg342721
30.7083 Ahg489290 ABL interactor-like protein 3
42.2493 Ahg949608 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
43.3013 Ahg472972 ADPGLC-PPase large subunit
45.1664 Ahg319526 F-box and associated interaction domains-containing protein
45.9783 Ahg475977 conserved peptide upstream open reading frame 53
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression