Detail



ID : Ahg481500

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481500|fgenesh2_kg.4__560__AT2G26430.1
Sequence
AAAACTCGAT TTCCCAATTT CGTCGCCTCT TCTCGTCTCT CCGCTCGCCT CACCGTGATT CTGTTTCGCC ACCGTGTATC TCCCAATTTG TTATCGTGAC CGTTGTTTGA TGATTTACAC TGCAATCGAC AATTTCTACC TAACCGACGA GCAGCTGAAG GCTTCACCTT CCAGGAAAGA TGGGATAGAT GAAAATACTG AAATCTCTCT TAGAATCTAT GGATGTGATC TTATCCAAGA GGGTGGCATA TTGCTCAAAC TACCACAGGC GGTTATGGCT ACTGGGCAGG TTCTGTTTCA CCGATTCTAT TGCAAGAAGT CTTTGGCTAA ATTTGATGTA AAGATAGTTG CTGCGAGCTG TGTCTGGCTT GCATCAAAAC TGGAAGAAAA CCCTAAAAAA GCTAGACAGG TCATCATCGT ATTCCACAGG ATGGAGTGTC GCAGGGAGAA CTTACCATTA GAACATCTCG ATATGTATGC CAAGAAGTTC TCTGAGTTGA AAGTTGAATT AAGCAGAACT GAGAGACATA TACTGAAAGA GATGGGTTTT GTTTGTCATG TTGAACATCC TCACAAGTTC ATATCAAACT ACCTTGCCAC ACTAGAAACA CCTCCAGAAT TGAGGCAAGA AGCTTGGAAT TTGGCTAATG ATAGTCTGCG TACAACCCTC TGTGTAAGGT TCAGAAGTGA GGTTGTGGCT TGTGGGGTCG TGTATGCTGC TGCCCGTAGG TTTCAAGTAC CTCTTCCAGA GAATCCACCC TGGTGGAAAG CATTTGATGC AGATAAATCT AGTATTGACG AAGTGTGTAG AGTTCTTGCT CACTTATACA GTCTTCCAAA GGCTCAGTAT ATCTCTGTTT GCAAGGATGG GAAGCCATTT ACCTTTTCCA GCAGATCTGG GAATTCTCAA GCTCAATCAG CTACAAAGGA TGTGTTGCCG GGAGTAGGGG AGGCTGTTGA TACAAAGTGT GCTCCAGGAT CAGCTAATAA CGACTCGAAG GATGGAATGG TTATTTCGCC TCACGCAAAG GGTACAGATT CAAAGAAGAG CGATACTGAG TCAAACAGCC AGCCAATAGT AGGAGACTCG AGGAACGGAA AAAGTAAAGT TGGAGAGAGA GAAAGAGAGA GTGGTAGAGA GAAGGAACGA GGTAGAGAGA GGGACAGGGC TAGGTCTCAC AGAGGCAGAG ATTCTGACAA GGAGAGTGAT AGGGAGAGAG ACAACCTCAA AGATCGGAGT CATCACCGGT CAAGAGATAG ATTGAAGGAT TCAGATAGAT CAAGACATCA CTCTTCTCGG GACCGTGACT ATCGAGAATC CTCCCACTCA TCAAAAGACC GTCGTAGGCA CCATTAAGCC AATCTTCTTG TCACTACATC ACCTTGAGTG TACTTGATGT TAAAGACAGT ATATTGTTGT ATTGTGTTAA AGAGTCAAAA ACCCATGTGT ACTCAATCAC ATGCTAAGAT CACGTTGGTT CGACATATAA AATCGAAAAG GTCTGATCTT TCTAATTTGG TATTTT 
Length1526
Protein Sequence
Protein Residue
Map Locationscaffold_4: 6139675.. 6142246
Download Sequence
A.thaliana
AGI-codeAT2G26430.1
Descriptionarginine-rich cyclin 1
TAIR curator summaryEncodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.
Alias[ATRCY1][MOS12][RCY1][ARGININE-RICH CYCLIN 1][modifier of snc1 12][arginine-rich cyclin 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg320039 shikimate kinase 1
9.16515 Ahg933547 high-level expression of sugar-inducible gene 2
11.4018 Ahg496203 Galactose oxidase/kelch repeat superfamily protein
16.4317 Ahg937129 metalloendopeptidases;zinc ion binding;DNA binding
18.8149 Ahg485546 Clathrin light chain protein
26.9444 Ahg480732 4-phosphopantetheine adenylyltransferase
30.0333 Ahg473369 acyl-CoA-binding protein 6
37.47 Ahg486112
40.1248 Ahg951489 WD-40 repeat family protein
43.8634 Ahg352131 ubiquitin-specific protease 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression