Detail



ID : Ahg933821

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933821|scaffold_401809.1
Sequence
CTCATAAGAA ATCTCCTCCC ATGGCGGATT CAAGTTCTTC TCTCCCTCCT CTTTGCGAGA AGATCTCATA CAAAAACTAT TTTCTAAGAG CTGTGGATCT CACGATTCTT GGCCTTCTCT TTTCTCTTCT CTTGTACCGA ATCCTACTTA TGAACCAAAA CAACACCGTT TGGGTTGTGG CTTTCCTCTG TGAATCTTTT TTCTCTTTCA TATGGCTTCT TATTACCTGC ATAAAATGGA GTCCTGCTGC ATATAAATCA TATCCTGAAA GACTTGATGA AAGGGTTCAT GACCTTCCAT CGGTAGATAT GTTTGTGACC ACGGCCGATC CGGTTCGGGA GCCGCCGATT CTTGTTGCAA ACACGTTGCT TTCGCTGTTA GCCTTGAATT ATCCAGCGAA TAAACTTGCT TGTTATGTAT CGGACGATGG ATGCTCACCT CTCACTTACT TCTCTCTCAA GGAAGCTTCT AAGTTCGCCA AGATTTGGGT TCCGTTCTGC AAAAAATACA ACGTTAAAGT TAGAGCTCCT TTTCGATATT TCTTAAACCC TCCAGTCCCA ACAGAAAGTT CTGAATTCAG TAAAGACTGG GAAATGACGA AGAGGGAGTA CGAGAAATTA AGCAGGAAGG TGGAAGATGC CACTGGAGAT TCCCATTGGT TGGATGCAGA AGATGACTTT GAAGCTTTCT CAAACACTAA ACCAAATGAT CATTCAACTA TAGTTAAGGT GGTATGGGAG AACAAGGGAG GTGTGGGAGA GGAGAACGAG GTTCCTCATT TTGTATATAT TTCAAGAGAG AAAAGACCAA ATTATCTTCA TCATTACAAA GCTGGAGCCA TGAACTTTCT GGTAAGAGTG TCAGGGTTGA TGACAAATGC ACCATACATG TTGAACGTAG ACTGCGACAT GTATGCCAAT GAAGCAGATG TGGTGCGACA AGCAATGTGT ATATTTCTGC AAAAATCAGT GAATTCAAAG CATTGTGCTT TTGTTCAATA CCCGCAAGAT TTCTATGATT CTAACGCCGA CGAACTCACC GTCTTACAAT CATATTTGGG ACAAGGAATT GCGGGAATCC AAGGACCTAT ATATGCGGGT TCAGGATGCT TCCACACTAG AAGAGTTATG TACGGTCTAT CAATAGATGA TTTAGAAGAA GATGGAAGTC TTTCTTCACT TGCAGCAAGG AAATATTTGG CTGAAGAGAA TTTAGAGAGA GAATTTGGGA ACTCTAAAGA GATGGTGAAA TCGGTGGTCG AGGCATTACA AAGACAACCA AATCCTCAGA ATACCCTTGC AAACTCCCTC GAAGCGGCTC AAGAAGTGGG ACATTGTCAT TATGAATACA AAACTAGCTG GGGCAAAACG ATCGGTTGGT TATACGAATC AACAGCGGAA GATGCAAACA CGAGTATCGG AATCCATTCG AGAGGGTGGA CTAGCTCATA TATATCTCCG GAACCACCAG CGTTTCTTGG GGCTATGCCG CCGGGAGGAC CCGAGGCGAT GCTCCAGCAG CGGCGATGGG CGACAGGACT TCTCGAAGTC CTTTTCAACA AACAAAGTCC GTTGATCGGA ATGTTTTGTC GGAAAATAAG ATTTCGACAA AGCTTGGCTT ATTTATACAT TTTCACTTGG GGTCTACGGT CAATCCCTGA GCTATTTTAT TGTCTCCTGC CTGCTTATTG CCTACTCCAC AACTCTGCCT TATTTCCCAA GGGGGTTTAT TTAGGTATAA TCGTCACGCT TGTGGGGATG CATTGTCTTT ACACTCTATG GGAATTTATG AGCCTTGGTT TTTCCGTACA ATCATGGTTT GTCTCCCAGT CATTTTGGAG GATAAAAACC ACTTGTAGTT GGTTATTTAG CATCCCTGAC ATCATACTCA AGCTACTTGG AATCTCGAAA ACTGTCTTCA TAGTCACTAA AAAGACTATG CCCAATAACA TGTCAGGGTC TGGATCCGGA AAATCTCAAC GAGAAGATGA TTGTCCAAAC AAAGATTCCG GTAAATTTGA ATTTGATGGC TCGCTTTATT TTTTGCCCGG CACATTTATT GTGTTGGTAA ATCTAGCCGC TATAGCCGGT TTCTCAGTGG GTCTACATCG GTTGAGTCAT CGTCACGGAG GAGGTAGTTC GGGTTTGGCA GAAGCTTGTG GATGTATTTT GGTGGTTACG TTGTTCCTTC CATTTCTTAA CGGTATGTTT GGGAAGGGAA AATATGGTAT CCCGTTGTCT ACTATTTCTA AAGCTGCCTT TTTAGCAGTT TTATTTGTCG TCTTCGCTCT ATAGATCCCT GATTCCTTCG TTTT 
Length2314
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14608550.. 14613203
Download Sequence
A.thaliana
AGI-codeAT2G32530.1
Descriptioncellulose synthase-like B3
TAIR curator summaryencodes a gene similar to cellulose synthase
Alias[ATCSLB03][ATCSLB3][CSLB03][cellulose synthase-like B3]
Gene coexpression
MR
MR Locus Description
6.85565 Ahg473866 Granulin repeat cysteine protease family protein
14.9666 Ahg496172 aleurain-like protease
17.6635 Ahg481314 FAD-dependent oxidoreductase family protein
19.799 Ahg479690 MATE efflux family protein
20.9762 Ahg319944
21.9089 Ahg482180 cellulose synthase-like B4
27.0555 Ahg480836 H(+)-ATPase 1
34.5543 Ahg900074 Protein of Unknown Function (DUF239)
39.95 Ahg482040 Plant protein of unknown function (DUF828)
44.7214 Ahg492857 VACUOLAR SORTING RECEPTOR 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression