Detail



ID : Ahg933944

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933944|scaffold_401932.1
Sequence
CCGTCGCCGG GATAAAAAAC ATGAGGAAGG AAGTTTTGCC GCCGGTGCTA TCAACCACCA CCGTCTGCTT CGAGAAGAAG CCATTAATTG CTACATTGCT AGCTCTCTCT CTCGTCATGA TTATCTGGAA CCTTCCTCCT TACTATCACA ACCTCATCTC CACCGCACGC CCCTGCTCCG CCGTCACCAC CACCACCACC ACCATACTTT CCTCATCGAA CTTCACAGCG GCGACGAATT TCACCACCTC TCTCTCAACC ACAACTGCTG CTGCTTCTCA GAAGTACGAT TCAACTCCCT CAGATCCGAA CAAACGCGTT TTCCAACCGT TCGGAAACGC GGCGGCGTTA TTCGTACTAA TGGGAGCTTA CCGCGGCGGT CCAACGACGT TTTCCGTTAT CGGACTCGCG TCAAAACCGA TCCACGTTTT CGGGAAGCCA TGGTACAAGT GTGAGTGGAT ATCAAACAAT GGAACTTCGA TTCGAGCTAA AGCACAGAAG ATTCTACCAG ATTGGGGCTA TGGCCGAGTC TACACCGTCG TCGTCGTCAA TTGCACTTTC AATTCAAACC CTAACTCCGA TAACACCGGA GGTAAGCTCA TACTCAACGC TTACTACAAC GAATCTCCGA AACTCTTTGA ACGATTCACT ACGTTAGAGG AATCAGCTGG AATCTACGAC GAATCGAAAT ACTCGCCGCC ATATCAGTAC GATTACCTCT ACTGTGGCTC GTCTCTGTAC GGAAACGTGA GCTCGTCGCG TATGAGAGAG TGGATGGCTT ACCATGCTTG GTTCTTTGGT GACAAATCGC ATTTTGTTTT CCACGATGCT GGTGGAGTGT CGCCGGAAGT TAGGAAGGTT CTTGAGCCGT GGATTCGAGC TGGGAGGGTC ACGGTTCAGG ATATTAGGGA TCAGTCGCAG TATGATGGTT ACTACTATAA TCAGTTTCTT ATTGTTAATG ATTGTTTGCA TCGGTATCGA TATGCTGCGA ATTGGACCTT CTTCTTCGAT GTTGATGAGT ACATATATCT GCCGCATGGG AATACACTTG AATCTGTGCT CCACGAGTTC TCGGTGAATA CGCAGTTTAC GATTGAGCAG AATCCAATGT CTAGTGTTCT TTGCTTAAAT GACTCCTCTC AAGATTATCC CAGGCAATGG GGATTTGAGA AGTTGCTATT TAAGGATTCA AGAACAAACA TACGACGTGA TAGGAAATAT GCGATCCAAG CGAAGAACGC ATTTGCCACA GGAGTTCACA TGTCTGAAAA CATAGTAGGC AAAACACTAC ACAAGACAGA GACAAAGATC CGTTATTACC ATTACCACAA CACTATAACT GTGCATGAGG AGCTTTGCAG AGAGATGTTA CCAAATTCAG CCAAGAAGAA GGTGACATTG TACAATAAGC TTCCGTATGT GTATGATGAC AACATGAAGA AGCTAGTGAA GACGATTAAA GAGTTTGAGC AGAAAAAACT TGGGACCGAT GTGAAGAATT TCTCATGACC AGAATATAAC TGTAATCT 
Length1528
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15119952.. 15121704
Download Sequence
A.thaliana
AGI-codeAT2G33570.1
DescriptionDomain of unknown function (DUF23)
TAIR curator summary
Alias[GALS1][galactan synthase 1]
Gene coexpression
MR
MR Locus Description
14.1421 Ahg480375 arabinogalactan protein 9
19.5448 Ahg945946 SKU5 similar 4
20.1246 Ahg497154 FASCICLIN-like arabinogalactan 2
23.6643 Ahg928939 Leucine-rich repeat (LRR) family protein
29.189 Ahg941021 early nodulin-like protein 17
29.5635 Ahg939416 PATATIN-like protein 9
32.187 Ahg481491 Leucine-rich receptor-like protein kinase family protein
33.0151 Ahg491000 beta-galactosidase 3
33.3167 Ahg933364 expansin A6
35.327 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression