| Annotation |
|---|
| Description | jgi|Araly1|934908|scaffold_402896.1 |
| Sequence |
ATTCTCCTAA TTTTCGAGAT ATGGCGGAAG TATCGATGGG AAGCAGCAGT AGCAGCACGG ATCTGTCTCC CGAGGAAGAG CGAGTTTTCA TCAGAGACAT TGCTATTGCT GCTGAGGCTA ACAGCAAAGA AGGCGATACA TTTTATCTCA TCACTCAGAG ATGGTGGCAA GAATGGATTG AGTATGTGAA TCAAGACCAA CCATGTAACA CTAATGATGG GTCTTCATTG TCAGAGCATT GCGACTCTCC TGGTTCAAGC ACACTAAAGA AGCCTTCTAG GATTGATAAC TCTGATTTGA TCTATGATTC TTCGCTGGAG GACCCGAGTA ATACCAGTGA GATTATTGAA ACACTTCAGG AAGGTCGTGA CTATGTTTTG CTCCCTCAAG AAGTGTGGAA CCAGTTGCGT TCATGGTACG GGGGTGGTCC AACTCTAGCG CGGAGAGTCA TTAGCTCAGG TCTCTCTCAA ACGGAGTTGG CTGTAGAGGT TTACCCTTTA CGTCTTCAGC TACTTCTGAT GCCAAAAAGT GACCATAGTT CCATAAGAAT TAGCAAAAAG GAAACTATCA GAGAGCTCCA TCGAAGAGCC TGTGAAATTT TTGACCTCAA CTCAGAGCAT GTACGCATTT GGGATTACTA CGGCCACCAA AAGTATTCTT TGATGAATGA CTTAGATAAG ACACTGGGCG ATGCTAACCT ACAAATGGAT CAGGATATTT TGGTGGAGGT GCTTGACATC AATGGTACAT TATCAAGTGC TCACATTCAA TCTGCTCAAG AGAACGGATT GGTGGATGAA GACTCTACTT CTATTCTCAT TGAGCCTTCT AAATCGAGCT TGGCTGCTGC AGGAGGGTTC TCTTCAAGCA GGAATGCATT CAGAACTGGT AGTGTAGAAG TTTCACAATC TTTTGATAGC ACATACAGTA GCACTGGCGT CACAACAAGG GGATCCACAG CTGGCTTAAC AGGGCTGCTA AATCTCGGGA ATACTTGTTT CATGAATAGT GCGATTCAGT GTCTGGTTCA TACACCTGAG TTTGCTAGTT ACTTTCAAGA AGATTATCAT CAAGAAATAA ATTGGCAAAA CCCTCTTGGC ATGGTGGGAG AATTAGCTCT CGCATTTGGT GACTTGCTCA GGAAGTTATG GGCTCCTGGG CGCACACCAA TTGCACCTCG TCCATTCAAA GCTAAACTTG CTCGCTTTGC TCCTCAATTT AGTGGGTACA ATCAACATGA TTCGCAGGAG CTTTTAGCGT TTCTGCTGGA TGGTCTTCAC GAGGACCTAA ATCGTGTTAA ACACAAACCA TATATAAATT CTCGAGACGC AGATGGGCGC CCTGATGAAG AAGTTGCTGA TGAGTTTTGG GCTAATCATA TTGCTCGTAA TGACTCAATA ATCGTTGATG TTTGTCAGGG CCAATATAAG TCAACATTGG TGTGTCCAAT CTGCAACAAG GTTTCTGTAA CATTTGACCC CTTCATGTAC CTGTCTTTGC CGCTTCAGTT CAACACAACA CGAGCAATAA CAGTCACAGT TTTTTCTTGT GATAAAACTG CCTTACCTTC CACTATCACA GTCAATGTTT CAAAGCAGGG ACGTTGCAGA GACTTGATTC AGGCATTAAC AAGTGCTTGT TCCTTGAAGC AAAGTGAAGA GCTGAAACTT GCAGAGATTC GGAATAATTT TATCCATCGA TTATTTGAAG ACCCTTTAAT TCCATTGTCC ACTATCAAAG ACGATGATCA CCTTGCTGCA TACAAACTTT CGAAGTCTTC GGAGAATACG ACTTTGCTTA GACTAGTACT TCGCCGCAGA GATCAGAAAG CTGGGGAACG TGAAAGTACA GTACAATTGA AACCCTGTGG AACACCCCTT CTCTCATCAG CTTCACGTGG AGATGCACTC ACCAAAGGAA AAATCCATTG CCTCATCCAG AATATGCTTT CACCTTTTCG GAGGGAAGAA TCTGTGGGCA AAAGAGGAAA TTCTGATTCT AGTATCCCCG AGAGAAGGTC AGCTCGATTT AATAATTCTG AGGAAGAAGA TAAAGTTGGT GGACTGAAAA AAGCCAAGAA AAGCAACTCC TCCGAATTGG GTGCTTCTAA ATTATCCCTG CAACTCATTG ATGAAAACAA TAAAACGATT AATCTGCCAG ACGATGAAGC AGAAGCTATT AAACTACCGT CATCAGCTAC AGTAACTATT TATTTGGATT GGACACCAGA ACTCTCTGGT ATGTATGATA TAACTTGCCT GGAGAGTTTG CCTGAAGTTC TCAAATACGG ACATGCTACC AAGAAGGCTC GTTCAGAACC TCTTTCTTTA TATGCCTGTT TGGAAGCGTT TCTACGCGAA GAGCCTTTGG TGCCTGACGA AATGTGGTTC TGTCCACAGT GCAATGAAAG ACGGCAGGCA AGCAAAAAGC TTGATCTGTG GAGGCTTCCT GAAGTCTTAG TCATACATCT AAAGAGATTC TCATACAGCA GATCCATGAA GCATAAATTG GAAACATTTG TTAACTTTCC TGTCCATGAC TTAGATCTAA CAAAGTATGT AGCCAACAAA AACCTATCTC AACCACAGCT ATATGAGCTC TATGCCTTGA CCAACCATTA TGGTGGTATG GGCAGCGGAC ACTACACTGC ACATATCAAG CTTTTGGACG ACAATAGGTG GTATAACTTC GATGACAGTC ATATATCACA TATAAACGAG GATGATGTGA AGTCTGGTGC TGCTTATGTG CTCTTCTACA GGAGGAAGTC TGATGCAGGA GGAGAAATGA AATAGTCCAA CACGAAAAGA CGATC |
| Length | 2815 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 18946883.. 18952873 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G40930.1 |
| Description | ubiquitin-specific protease 5 |
| TAIR curator summary | Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. |
| Alias | [ATUBP5][PDE323][UBP5][PIGMENT DEFECTIVE EMBRYO 323][ubiquitin-specific protease 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.91608 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 12.8062 |
Ahg930446 | RNA recognition motif (RRM)-containing protein |
| 13.2288 |
Ahg900511 | |
| 16.5831 |
Ahg340770 | Protein of unknown function (DUF300) |
| 16.9115 |
Ahg325939 | |
| 20.5913 |
Ahg482889 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 24.3311 |
Ahg348567 | dentin sialophosphoprotein-related |
| 27.1662 |
Ahg495855 | Calmodulin-binding protein |
| 29.9333 |
Ahg935295 | MAP kinase 6 |
| 30.3315 |
Ahg480562 | high-affinity nickel-transport family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|