Detail



ID : Ahg935295

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935295|scaffold_403283.1
Sequence
AGCTTTCATC TTTACCGGTC ATGGACGGTG GTTCAGGTCA ACCGGCGGCT GATACAGAGA TGACGGAAGC TCTCGGTGGT GTTCCCGCGG CGGCTCCTTC TCAGCCATCG CCTCAGATGC CCGGTATTGA GAATATTCCG GCGACTCTTA GCCATGGTGG TAGGTTTATT CAGTATAACA TATTTGGAAA CATCTTTGAG GTCACCGCTA AGTATAAGCC TCCGATCATG CCTATTGGCA AGGGTGCTTA TGGCATCGTT TGTTCGGCTA TGAACTCTGA AACAAATGAG AGCGTTGCAA TTAAGAAAAT CGCTAACGCT TTTGACAATA AGATTGATGC AAAGAGGACT CTCCGTGAGA TTAAACTGCT TCGTCATATG GATCATGAAA ATATTGTTGC AATCAGAGAT ATAATCCCGC CACCATTAAG AAACGCTTTC AACGATGTTT ACATCGCGTA TGAGCTAATG GACACTGATC TCCATCAAAT CATACGGTCA AATCAAGCAT TATCCGAAGA ACATTGCCAG TATTTTCTTT ACCAGATCCT CCGTGGATTG AAATACATTC ATTCCGCAAA TGTGCTTCAC AGGGATTTGA AACCAAGTAA TCTCCTCCTG AACGCAAACT GCGACCTAAA AATCTGCGAT TTTGGGCTAG CTCGAGTCAC TTCCGAGAGT GATTTCATGA CTGAATATGT TGTCACGAGA TGGTACCGTG CACCAGAGCT GCTCTTAAAC TCTTCTGATT ATACTGCAGC TATCGATGTT TGGTCTGTAG GCTGTATTTT CATGGAGTTA ATGGACCGTA AGCCACTCTT CCCTGGACGA GATCATGTCC ATCAGCTTCG CTTGCTCATG GAGCTCATAG GAACTCCATC AGAAGCAGAG CTTGAGTTCT TGAACGAAAA TGCAAAGCGA TACATAAGAC AGCTTCCACC TTATCCTCGC CAATCCATCA CTGATAAGTT CCCGACAGTG CATCCTTTAG CTATAGACCT TATCGAGAAG ATGTTAACAT TTGATCCTAG ACGGAGAATC ACAGTTTTAG ACGCATTGGC CCATCCATAC CTGAACTCAT TGCACGACAT AAGCGATGAG CCAGAGTGTA CGATACCTTT CAACTTTGAC TTTGAAAACC ATGCACTCTC AGAGGAGCAA ATGAAGGAAC TTATCTACCG CGAGGCGCTT GCTTTCAATC CAGAATATCA GCAATAATTT AAAGAACAGC ATTTGGG 
Length1237
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20314528.. 20316812
Download Sequence
A.thaliana
AGI-codeAT2G43790.1
DescriptionMAP kinase 6
TAIR curator summaryEncodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.
Alias[ATMAPK6][ATMPK6][MAPK6][MPK6][MAP kinase 6]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg482227 Protein kinase superfamily protein
12.4499 Ahg920696 vacuolar protein sorting 46.1
13.4164 Ahg470748 Calcium-dependent lipid-binding (CaLB domain) family protein
15.6205 Ahg918895 cytochrome c oxidase assembly protein CtaG / Cox11 family
16.7332 Ahg478277 Lung seven transmembrane receptor family protein
19 Ahg486396 ENTH/VHS family protein
22.2036 Ahg480605 Protein kinase superfamily protein
22.4722 Ahg495780 CwfJ-like family protein / zinc finger (CCCH-type) family protein
25.6905 Ahg474488 mitogen-activated protein kinase kinase kinase 3
27.4955 Ahg490436
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression