| Annotation |
|---|
| Description | jgi|Araly1|935061|scaffold_403049.1 |
| Sequence |
GCTTATATGC GTTACTGATA ATGGATAATC ACGGTCCACG GTATCCATAC CCTTACGGTC AGTACCCGTA CCCTTACCCA TACCCAGCTC CTTATAGACC TCCCAGTTCA GAGCCATACC CACCGCCCCC TACCAATCAA TACAATGCCC CTTATTATCC TTACCCACCT CCGCCATACG CAACACCACC ACCACAACCA CCATATGCAT CACCACCACC TCATCAACAC ACTTCGGGTT CGTATTCTGG CCCATTAGAC TATAGCCACA ATCCACAACC ATCATCTCAC GCGGCTCCTC CAGAGTATCA CCGACCTTCT TTTGACTACC AACCTTCTCC TTACCCTTAT TCTGGTCATC AACCGCAAGC TAACTTCGGT GCTTATGGTC CGCCTCCTCA CTATTCGTCG TATCAAGAGC CAGCTCAATA CCCCCCACCG GAAACTAAAC CGCAAGAGGC TCCTCCGCAA ACTCAAGGTT ATCCAGAATA TCGTAGGCAA GATTGTCTCA GCTCCGGGGG AACAGGTCAT GATAATGTAA GCAATTCTGG ATCTTCTTAT CCTCCCGTGG ATGAACTTCT AGGTGGTCTG CACATTTCTA CAAACCAACC AGGCCCCTCA GTTCCACAAT TATCTTCCCT CCCTTCGAAC TCTTGGCAAA GCCGCCCTGG GGACTTGTAT GGTTACCCTA ACAGCTCGTT TCCAAGTAAC TCTCATTTGC CACACTTAGG GAGAGTAGAT TCGTCAAGTT CTTATACTCC TAGCTATGCA TCTACCGAAT CCCCACATAG TGCGGATATG CAGATGACTC TGTTTGGTAA AGGGTCTTTG AAGGTCCTGT TGTTGCATGG GAATTTGGAT ATTTGGATCT ATCATGCAAA AAATCTCCCT AACATGGATA TGTTCCATAA GACACTGGGT GATATGTTTG GAAGATTGCC AGGAAAAATT GAAGGGCAGC TTAGTAGTAA GATTACCAGT GACCCTTACG TTTCTGTATC AGTTGCAGGT GCTGTGATTG GAAGAACATA TGTCATGAGT AACAGCGAAA ATCCTGTTTG GATGCAACAT TTTTATGTTC CTGTTGCTCA TCATGCTGCA GAAGTTCATT TTGTTGTTAA AGACAGTGAT GTTGTGGGTT CACAGCTAAT AGGGTTGGTT ACAATCCCGG TGGAACAGAT ATACTCAGGT GCCAAAATTG AAGGAACTTA TCCGATACTA AACAGTAATG GGAAGCCTTG TAAACCAGGG GCAAATTTAT CATTATCGAT CCAGTATACT CCTATGGACA AACTCAGTGT TTATCATCAT GGAGTTGGGG CAGGTCCTGA TTACCAAGGG GTACCTGGAA CATATTTTCC GCTTAGAAAA GGCGGAACTG TGAGATTGTA TCAAGATGCA CATGTCCCAG AAGGGATGCT CCCTGGTATA AGACTGGACA ATGGAATGTC TTACGAACAT GGGAAGTGTT GGCATGATAT GTTCGATGCC ATACGCCAGG CAAGGCGTTT AATTTATATC ACAGGTTGGT CAGTGTGGCA CAAAGTTAGG CTGGTTCGTG ATAAATTAGG TCCGGCATCC GAATGTACTC TTGGGGAGCT CCTAAGATCA AAGTCCCAAG AAGGCGTGAG AGTCCTCCTT TTGATTTGGG ATGACCCAAC TTCACGTAGC ATCTTGGGTT ATAAAACAGA TGGGGTAATG GCAACCCATG ATGAGGAGAC ACGACGTTTT TTTAAGCACT CCTCAGTTCA AGTCCTGCTT TGCCCCCGAA ATGCTGGAAA GCGACATAGT TGGGTCAAGC AGAGGGAAGT TGGGACAATC TATACACATC ATCAAAAAAA CGTAATAGTA GATGCTGATG CTGGTGGTAA CAGAAGGAAA ATCGTAGCTT TTGTCGGTGG GCTTGATCTG TGCGATGGCC GATATGACAC TCCTCAACAT CCGTTGTTCA GGACACTACA GACAGTTCAT AAAGATGATT TTCACAACCC CACTTTTACG GGAAATCTTT CAGGATGTCC AAGAGAGCCG TGGCATGACT TACACAGTAA GATCGATGGC CCGGCTGCGT ATGATGTGCT GACCAACTTC GAGGAGAGAT GGTTGAAGGC TGCGAAGCCT AGCGGAATCA AGAAGTTTAA GACTTCCTAT GACGATGCGT TGTTAAGGAT TGATAGGATT CCAGATATAT TAGGAGTTTC TGATACTCCT ACTGTTAGTG AGAACGATCC TGAGGCTTGG CATGTTCAGA TTTTCCGTTC AATCGATTCA AACTCTGTGA AAGGTTTCCC AAAGGATCCG AAAGATGCTA CATGCAAGAA CTTGGTGTGT GGGAAGAACG TGCTGATTGA TATGAGCATA CACACAGCGT ATGTCAAAGC CATTCGTGCA GCCCAACACT TCATCTATAT TGAGAATCAG TATTTCATTG GGTCTTCCTA CAACTGGAAT GCGCATAAGG ACATAGGTGC GAATAATTTG ATTCCTATGG AAATTGCGTT GAAGATAGCT GAAAAGATCA GGGCAAATGA ACGGTTTGCT GCTTATATTG TCATTCCAAT GTGGCCAGAA GGTGTTCCAA CCGGTGCTGC TACACAGAGG ATTCTATATT GGCAGCACAA GACAATGCAG ATGATGTATG AGACTATATA CAAGGCGTTA GTGGAGACAG GGCTTGAAGG AGCATTCTCC CCACAAGATT ACCTCAATTT CTTCTGTCTT GGGAACAGAG AAATGGTGGA TGGAATCGAT AACTCAGGAA CAGGGAGTCC AAGCAATGCA AACACTCCTC AGGCGTTGAG TCGGAAAAGC AGAAGATTTA TGGTCTATGT TCACTCGAAA GGGATGGTAG TTGATGATGA ATACGTATTG ATTGGATCTG CAAACATAAA CCAACGATCA ATGGAAGGCA CAAGAGATAC AGAGATTGCA ATGGGAGCTT ACCAGCCTCA ACATACATGG GCAAGGAAAC ATTCTGGTCC TCGGGGTCAG ATATATGGAT ACAGAATGTC TCTTTGGGCA GAGCATATGG CAACATTAGA TGACTGTTTC ACCCAACCGG AAAGTATAGA ATGTGTAAGG AAAGTGAGAA CAATGGGAGA GAGGAACTGG AAACAGTTTG CAGCTGAAGA AGTCTCAGAC ATGAGAGGAC ATTTATTAAA GTACCCAGTA GAAGTTGATC GGAAAGGTAA AGTCAGACCA CTTCCCGGGA GTGAGACGTT CCCGGACGTC GGAGGTAACA TTGTCGGATC GTTCATAGCC ATACAAGAGA ATCTAACCAT ATGATAACAA GGAAGCAGTG GCAC |
| Length | 3304 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19520682.. 19525860 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G42010.1 |
| Description | phospholipase D beta 1 |
| TAIR curator summary | phospholipase D (PLDbeta) |
| Alias | [PLDBETA][PLDBETA1][phospholipase D beta 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.2915 |
Ahg484508 | global transcription factor group E8 |
| 5.47723 |
Ahg486186 | villin 3 |
| 5.65685 |
Ahg943625 | glycosyl transferase family 1 protein |
| 6.63325 |
Ahg478844 | phosphatidylinositol-4-phosphate 5-kinase family protein |
| 6.7082 |
Ahg327819 | Plasma-membrane choline transporter family protein |
| 6.7082 |
Ahg488832 | RING/U-box superfamily protein |
| 13.6382 |
Ahg336188 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| 13.7477 |
Ahg481296 | DNA repair ATPase-related |
| 14.2829 |
Ahg483731 | U-box domain-containing protein kinase family protein |
| 15.1658 |
Ahg931278 | RING/U-box superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|