Detail



ID : Ahg327819

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327819|fgenesh1_pm.C_scaffold_7000046
Sequence
ATGGCGGCGG ACGACGGCGA CCCCACTAAA TTCGCTGCAA TCTACGACTC ATCCTCTCCG TCGCACCCTC TTCTCTCTAA ACCCTCCACG TCCGCTCTCG ATTCTCCGCG TCGAAGTGAT CCCGAATCCG ACCCAACTCA GTTTCTTCAG ATCTCCTACA ATTTTGGCCC CAGAACTTTC AAGGACATCC CTTTCCTTCT TCTCTTCGAT CTTCTCGTAC TCTCCACCTT TGGTTTTGGA ATCTTCTCCG TTTTCCATAG AAATAGCGAT TACGGGAGCT CCTCTTCCTT CACCTACGAT TTCCACTCTA GCTCCTGCGT CAAAAATTCC ACCTTTACGA AAATTTCGGA TGGATACTAC TCGAGTGTCA TGTACGGTAT GGTTTCTTCG TCTGATCCAG TCTTTGAGAA GGATTTAATC TGGACCCTTG TTGTAACGCT CATCTTAAGC GTGCCCTTCT GTTTTAGCGT CCTGCTTTTG CTCAAACACT ACACTAAGCA GATTGTTTAT GCTTGTTTAC CTCTCTTTGT CCTTTTCCCC ATCTTTTTCA ATCTCTATTG GTTTGTCGCT TGTACTCTTA GCTCTTCTTG TAGTGACGCC CTCCCTCTAG CTTACAGAAT TCTTGTCCTA GTCTTCGTTT TCTTGATCAT CGGGATCATT GTCTGGATCA TAGTAGCTAA TTGGCACAGA ATTGAGCTCA CTATCCAAAT CATCAGTGTT GCATCGGATG CCTTGTCCAA AAATTTGAAG CTTTTTGTTG TGTTGCCGCT GCTGACTCTC GGGTTAGTGG TGTACTATGC GCCGATTGTG GTGTTCTTGG TGTTTGCAAA GTTTAATGGG AAGTTTGTGC CGCGAGAGTT GGATGGTCAC TACTTTTGTG AGTGGAAGGA AGATTCTTGG GTTCCTGCGT ATTACGCTCT TGCCATTTTA ACGATGCTTT GGTCTCTTGC TGTAATGGTG GAAATGCAAG TCTATGTGAT AAGTGGAGCT ATTGCGCAGT GGTATTTCTC TAAGGAAGAC TCAGTGCCTA AAAAATGCAT CCGGAGTTCT TTGAGGAACG CATTTGGTCA ATCCTTTGGT ACAATATGTG TATCAGGACT TCTCATCTGC ATTGTTCGTG TGGTCCGGGC AATTGTGGAC AATGCAAGAG AAGAGAACCC ACAAGGGATA GTGAACTTGG TTCTCCGTTG CTGCGCAAAC GCCTTACTTG GAGCCCTTGA CTATCTCAAC AAGTTCACCA TCAACTTTGC TGCAATAACA GGGGAAGCCT ATTGCACCTC TGCGAAAATG ACTTATGAGC TCTTAAGACG CAACCTACTG TCAGCTGTAT TTGTGGAAAC GGTTTCCACC AGAATCCTGA CCGGAATCGT CTTTGTCCTC TCAGCCGCAT ATGCAGTCGC GACATGGGCT GTTCTGAGAG GCGTGAGCAA CCTGGGTATA GATTCGTACT TGGTGGCTAT ACTGGCGTGG CTGTTACTGA TTGTGGTCTT GGCTTTCTTT GTACATGTTC TTGACGATGT GATAGACACA ATCTATGTCT GTTACGCGAT TGATAGAGAC AAAGGGGATG TATGTAAGCA GGAAGTTCAC GAGGTGTATG TTCACTTGCC TATAAGCAGA AGCACAAGAT CTTCTCTAAT CCCAACTGCT CTGAATGCAT AG 
Length1662
Protein Sequence
Protein Residue
Map Locationscaffold_7: 179584.. 181731
Download Sequence
A.thaliana
AGI-codeAT4G38640.1
DescriptionPlasma-membrane choline transporter family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.7082 Ahg935061 phospholipase D beta 1
9.21954 Ahg489225 phosphate deficiency response 2
10.9545 Ahg902795 WD40/YVTN repeat-like-containing domain;Bromodomain
15.2971 Ahg485955 P-glycoprotein 20
20.6882 Ahg342166 pumilio 5
21.166 Ahg475301 pre-mRNA processing ribonucleoprotein binding region-containing protein
24.8998 Ahg328525 KNOTTED1-like homeobox gene 5
25.1396 Ahg479911 Beta-glucosidase, GBA2 type family protein
29.4449 Ahg492240 Calmodulin-binding protein
32.3265 Ahg313056 Preprotein translocase SecA family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression