Detail



ID : Ahg935200

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935200|scaffold_403188.1
Sequence
TTTGCTCCGT CGATTGCGTC ATGTCGTCGT TTGATCCGCC GAATCACCGA TACTCTTCCT TAGTATTGAT TCTTCTTCTG CTTGGTTTCT CGGTAGCGGC GGCCGACGAT GTATCATCGT GGACCGAGGA TTCCAGCCTC GAGTCTCCTG GCTGTACCAA TAAGTTTCAA ATGGTAAAGG TCTTAAATTG GGTTGATGGT GTTGAAGGAG ACTATCTTAC TGGCTTAACT GCTCAATTTG GAGCAGCCTT GCCTTCTGTT GCTGATCAAA GTCTTCGATT TCCGGCTGCT TTTGTAGATC CTTTGGACTC TTGTTCCAAT ATCTCTTCCA GATTAGATGG ACATATTGCC TTGTCGATCC GTGGCAATTG TGCTTTCACT GAGAAGGCAA AACATGCTGA GGCAGCTGGT GCTTCTGCTC TCTTGGTTAT TAATGACAAA GAAGATCTTG ATGAGATGGG ATGTATGGAA AAGGACACAT CTCTAAATGT GAGCATACCT GTCTTGATGA TCTCCAAGTC GAGCGGGGAT GCTCTCAACA AGTCTATGAT AGACAATAAG AGTGTTGAGC TTTTGTTGTA TGCTCCAAAG CGTCCTGTCG TGGACCTCAC AGCTGGATTG TTATTGCTCA TGGCTGTGGG AACTGTTGTC GTTGCATCAC TGTGGTCAGA GCTTACAGAT CCTGACCAAG CTAATGAATC TTACAGCATA TTAGCAAAGG AATTTCCTAG TGCTGGGACC AGAAAAGATG ACCCAGAGAA GGAAATCCTT GATATAAGTG TCACTGGTGC TGTATTTTTT ATTGTAACAG CCTCCATTTT TCTGCTGCTC CTTTTCTACT TCATGTCATC ATGGTTTGTA TGGGTGCTCA CCATATTTTT CTGCATTGGC GGCATGCAGG GTATGCATAA CATCATTATG GCAGTTATAT TGAGAAAATG CAGACATCTT GGTCGGAAAT CTGTGAAGCT CCCTTTGCTT GGAACAATGT CAGTGTTGTC GCTTTTGGTG AATATTGTTT GTTTGGCGTT TGCTGTTTTC TGGTTTATAA AACGACACAC ATCGTATTCT TGGGTTGGCC AAGACATTTT GGGCATATGT TTGATGATCA CTGCCTTGCA AGTGGTTCGA TTACCTAACA TCAAGGTTGC TACTGTACTT CTTTGCTGCG CGTTTGTGTA TGACATTTTC TGGGTCTTCA TATCACCATT GATATTTCAC GAGAGTGTTA TGATTGTGGT TGCCCAAGGA GACAGCAGCA GCGGAGAGTC CATTCCGATG CTACTAAGGA TTCCTCGGTT CTTTGATCCT TGGGGTGGTT ATGACATGAT TGGTTTTGGG GACATCCTCT TCCCCGGTTT GCTCATTTCC TTTGCTTCCA GATATGACAA GATAAAAAAG AGGGTAATAT CAAATGGGTA CTTCCTCTGG TTGACTATCG GCTATGGAAC AGGTCTGTTA CTGACATATC TAGGTCTGTA TCTTATGGAC GGACATGGCC AGCCTGCGCT ATTGTACATC GTACCCTGCA CACTCGGTTT GGCCGTCATA CTGGGGTTGG TAAGAGGAGA GCTTCAAGAA CTATGGAATT ACGGTAGTGA AGAATCAGAG TCTCACACAA CGGAGGATCC AATGCCTGTG GCATAATAAC ATGATTCAAC AATCTA 
Length1666
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20022820.. 20026500
Download Sequence
A.thaliana
AGI-codeAT2G43070.1
DescriptionSIGNAL PEPTIDE PEPTIDASE-LIKE 3
TAIR curator summary
Alias[ATSPPL3][SPPL3][ARABIDOPSIS THALIANA SIGNAL PEPTIDE PEPTIDASE-LIKE 3][SIGNAL PEPTIDE PEPTIDASE-LIKE 3]
Gene coexpression
MR
MR Locus Description
14.8997 Ahg917411 autoinhibited Ca2+ -ATPase, isoform 8
16.9706 Ahg474984 Protein of unknown function (DUF3741)
19.4422 Ahg358221 BTB/POZ domain-containing protein
19.5959 Ahg923204 DEA(D/H)-box RNA helicase family protein
20.7364 Ahg482201 LEUNIG_homolog
21.5407 Ahg355042 pleckstrin homology (PH) domain-containing protein
21.9773 Ahg483227 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
24.7992 Ahg473263 multidrug resistance-associated protein 1
27.2029 Ahg474459 phosphoenolpyruvate carboxylase 1
29.1548 Ahg473822 Peptidase M20/M25/M40 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression